RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SATB1Q01826 763 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 SERINC3Q13530 473 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 CRY1Q16526 586 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 TMCO3Q6UWJ1 677 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 SERPINA13PQ6UXR4 307 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 ARHGAP12Q8IWW6 846 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 MAML2Q8IZL2 1156 aaPredicted RBP12.61□□□□□ -0.39
PRKCB-205ENST00000472066 NPWQ8N729 165 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 EXD1Q8NHP7 514 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 UBE2Q2Q8WVN8 375 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 HMCESQ96FZ2 354 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
PRKCB-205ENST00000472066 SLC25A13Q9UJS0 675 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 SLC8A2Q9UPR5 921 aa12.61□□□□□ -0.39
PRKCB-205ENST00000472066 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 MYOFQ9NZM1 2061 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 CXorf51AA0A1B0GTR3 108 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 A0A1W2PQF6 199 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 MT-CO1P00395 513 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 HOXB2P14652 356 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PRKCHP24723 683 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 NNMTP40261 264 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 CDKN2BP42772 138 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 STK19P49842 368 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PAPOLAP51003 745 aaKnown RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 RWDD2BP57060 319 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 ARF5P84085 180 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 SLC20A2Q08357 652 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PAFAH1B3Q15102 231 aaKnown RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 TAZQ16635 292 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 NCBP2-AS2Q69YL0 99 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 RETSATQ6NUM9 610 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 LINGO4Q6UY18 593 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 SPOCD1Q6ZMY3 1216 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PQLC3Q8N755 202 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 NETO2Q8NC67 525 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 HES6Q96HZ4 224 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PRDM16Q9HAZ2 1276 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
PRKCB-205ENST00000472066 SUN2Q9UH99 717 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 HS3ST2Q9Y278 367 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
PRKCB-205ENST00000472066 ARHGAP42A6NI28 874 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 TTC34A8MYJ7 566 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 MIF4GDA9UHW6 222 aaKnown RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 K7ESF4 209 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 DFFAO00273 331 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 ATP9BO43861 1147 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 CD160O95971 181 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 EPHX1P07099 455 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 HLA-EP13747 358 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 COL9A1P20849 921 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 SERPINB6P35237 376 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 DGKEP52429 567 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 MEI1Q5TIA1 1274 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 KIAA1211LQ6NV74 962 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 TSSK4Q6SA08 328 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 TP53INP2Q8IXH6 220 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 UBL4BQ8N7F7 174 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 ZNF366Q8N895 744 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 ATP11CQ8NB49 1132 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 TRIM58Q8NG06 486 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 ALG3Q92685 438 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 RBM41Q96IZ5 413 aaKnown RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 POLMQ9NP87 494 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
PRKCB-205ENST00000472066 PACSIN2Q9UNF0 486 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRKCB-205ENST00000472066 J3KR12 359 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 K7ERQ8 282 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 SMAD6O43541 496 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 SYNCRIPO60506 623 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 SRCP12931 536 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 KRT10P13645 584 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 ZFXP17010 805 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 SERPINH1P50454 418 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 GEMIN4P57678 1058 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 COPS2P61201 443 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 CAMK2GQ13555 558 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 STARD3Q14849 445 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 DLG2Q15700 870 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 HNRNPA1L2Q32P51 320 aaKnown RBP12.58□□□□□ -0.4
PRKCB-205ENST00000472066 ACCSLQ4AC99 568 aa12.58□□□□□ -0.4
PRKCB-205ENST00000472066 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms