RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PMF1Q6P1K2 205 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 GUSBP11Q6P575 273 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 FOXR1Q6PIV2 292 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 EFL1Q7Z2Z2 1120 aaKnown RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 ABI3BPQ7Z7G0 1075 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 HORMAD1Q86X24 394 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 WDR36Q8NI36 951 aaKnown RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 DQX1Q8TE96 717 aaKnown RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 CLEC4CQ8WTT0 213 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 ARRDC3Q96B67 414 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 EEF2KMTQ96G04 330 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 PAGE5Q96GU1 130 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 DNAJC28Q9NX36 388 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 NCKIPSDQ9NZQ3 722 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 SERTAD1Q9UHV2 236 aa19.56■□□□□ 0.72
SORT1-203ENST00000471996 XPO7Q9UIA9 1087 aaKnown RBP19.56■□□□□ 0.72
SORT1-203ENST00000471996 BOD1L1Q8NFC6 3051 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 CPED1A4D0V7 1026 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 RIOK3O14730 519 aaKnown RBP19.55■□□□□ 0.72
SORT1-203ENST00000471996 MCF2LO15068 1137 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 ATP9BO43861 1147 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 TCEA3O75764 348 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 FYNP06241 537 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 PDGFRAP16234 1089 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 PLK1P53350 603 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 CLDN2P57739 230 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 ACCSLQ4AC99 568 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 PIP5KL1Q5T9C9 394 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 RESP18Q5W5W9 173 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 GCNT7Q6ZNI0 430 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 ERCC4Q92889 916 aaPredicted RBP19.55■□□□□ 0.72
SORT1-203ENST00000471996 ARHGAP9Q9BRR9 750 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 KIAA1257Q9ULG3 409 aa19.55■□□□□ 0.72
SORT1-203ENST00000471996 EME2A4GXA9 379 aaPredicted RBP19.54■□□□□ 0.72
SORT1-203ENST00000471996 GJB6O95452 261 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 ITGB2P05107 769 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 ZNF18P17022 549 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 TACR2P21452 398 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 RPL13P26373 211 aaKnown RBP19.54■□□□□ 0.72
SORT1-203ENST00000471996 NUCB2P80303 420 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 ADAM9Q13443 819 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 CUL2Q13617 745 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 RAP1GAP2Q684P5 730 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 LCLAT1Q6UWP7 414 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 Q6ZSR6 202 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 USP53Q70EK8 1073 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 CHSY1Q86X52 802 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 DCP2Q8IU60 420 aaKnown RBP19.54■□□□□ 0.72
SORT1-203ENST00000471996 ZNF548Q8NEK5 533 aaPredicted RBP19.54■□□□□ 0.72
SORT1-203ENST00000471996 FAM174AQ8TBP5 190 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 ANKMY1Q9P2S6 941 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 CSNK1G3Q9Y6M4 447 aa19.54■□□□□ 0.72
SORT1-203ENST00000471996 ACTN4O43707 911 aaKnown RBP19.53■□□□□ 0.72
SORT1-203ENST00000471996 FBXO21O94952 628 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 AFPP02771 609 aaKnown RBP19.53■□□□□ 0.72
SORT1-203ENST00000471996 ITGA2BP08514 1039 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 DLG2Q15700 870 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 Q6ZVU0 165 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 CCAR2Q8N163 923 aaKnown RBP19.53■□□□□ 0.72
SORT1-203ENST00000471996 EXTL1Q92935 676 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 SGF29Q96ES7 293 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 GPR27Q9NS67 375 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 SALL4Q9UJQ4 1053 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 NAALADL1Q9UQQ1 740 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 HS3ST3A1Q9Y663 406 aa19.53■□□□□ 0.72
SORT1-203ENST00000471996 NYNRINQ9P2P1 1898 aaKnown RBP19.53■□□□□ 0.72
SORT1-203ENST00000471996 COL27A1Q8IZC6 1860 aaPredicted RBP19.52■□□□□ 0.72
SORT1-203ENST00000471996 CCDC187A0A096LP49 1063 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 A6NNZ2 444 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 APOEP02649 317 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 CSF2P04141 144 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 SFTPCP11686 197 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 NME1P15531 152 aaKnown RBP19.52■□□□□ 0.72
SORT1-203ENST00000471996 INHBCP55103 352 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 YWHAEP62258 255 aaKnown RBP19.52■□□□□ 0.72
SORT1-203ENST00000471996 CCDC15Q0P6D6 951 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 FZD2Q14332 565 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 CRTC1Q6UUV9 634 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 TFAP2BQ92481 460 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 BMFQ96LC9 184 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 HSFY1Q96LI6 401 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 SEMA3CQ99985 751 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 UPF2Q9HAU5 1272 aaKnown RBP19.52■□□□□ 0.72
SORT1-203ENST00000471996 WDR70Q9NW82 654 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 SLC25A13Q9UJS0 675 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.72
SORT1-203ENST00000471996 ZFR2Q9UPR6 939 aaKnown RBP19.52■□□□□ 0.72
SORT1-203ENST00000471996 F5H5T6 163 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 H3BM21 787 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 STX10O60499 249 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 OXCT1P55809 520 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 NR0B2Q15466 257 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 PERM1Q5SV97 790 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 OR6B2Q6IFH4 312 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 CXorf57Q6NSI4 855 aaKnown RBP19.51■□□□□ 0.71
SORT1-203ENST00000471996 PTAR1Q7Z6K3 402 aaPredicted RBP19.51■□□□□ 0.71
SORT1-203ENST00000471996 TAC4Q86UU9 113 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 CIR1Q86X95 450 aaPredicted RBP19.51■□□□□ 0.71
SORT1-203ENST00000471996 UBR7Q8N806 425 aa19.51■□□□□ 0.71
SORT1-203ENST00000471996 WDR48Q8TAF3 677 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms