RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 ANKRD1Q15327 319 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 TAF12Q16514 161 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 AP5B1Q2VPB7 878 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 TMEM95Q3KNT9 176 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 GXYLT1Q4G148 440 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 C6orf10Q5SRN2 563 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 FAM171A1Q5VUB5 890 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 DENND1BQ6P3S1 775 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 AAGABQ6PD74 315 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 GALNT7Q86SF2 657 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 CCDC25Q86WR0 208 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 GPSM1Q86YR5 675 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 MMP21Q8N119 569 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 ARFGAP1Q8N6T3 406 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 CMASQ8NFW8 434 aaPredicted RBP4.24□□□□□ -1.73
MDM2-216ENST00000471946 SMG7Q92540 1137 aaKnown RBP4.24□□□□□ -1.73
MDM2-216ENST00000471946 CENPIQ92674 756 aaPredicted RBP4.24□□□□□ -1.73
MDM2-216ENST00000471946 RNFT2Q96EX2 444 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 CLMNQ96JQ2 1002 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 TWNKQ96RR1 684 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 REEP2Q9BRK0 252 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.24□□□□□ -1.73
MDM2-216ENST00000471946 SEMA4BQ9NPR2 832 aaPredicted RBP4.24□□□□□ -1.73
MDM2-216ENST00000471946 RASSF1Q9NS23 344 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 CD207Q9UJ71 328 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 PCDHA12Q9UN75 941 aa4.24□□□□□ -1.73
MDM2-216ENST00000471946 CACNA1IQ9P0X4 2223 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 CKAP5Q14008 2032 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 TMEM272A0A1B0GTI8 110 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 C17orf100A8MU93 164 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 SOCS2O14508 198 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 CCNT1O60563 726 aaKnown RBP4.23□□□□□ -1.73
MDM2-216ENST00000471946 METTL18O95568 372 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 POLBP06746 335 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 TNNT1P13805 278 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 HNF1BP35680 557 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 C5orf22Q49AR2 442 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 FBXO43Q4G163 708 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 ASPHD1Q5U4P2 390 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 TMEM268Q5VZI3 342 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 NUGGCQ68CJ6 796 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 NAPEPLDQ6IQ20 393 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 AADACL2Q6P093 401 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 IGFN1Q86VF2 1251 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 HERVK_113Q902F9 699 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 NCSTNQ92542 709 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 ZNF419Q96HQ0 510 aaPredicted RBP4.23□□□□□ -1.73
MDM2-216ENST00000471946 ZNF48Q96MX3 618 aaPredicted RBP4.23□□□□□ -1.73
MDM2-216ENST00000471946 POT1Q9NUX5 634 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 SAGE1Q9NXZ1 904 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 RRN3Q9NYV6 651 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 GGA3Q9NZ52 723 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 HDAC6Q9UBN7 1215 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 PLEKHB1Q9UF11 243 aaPredicted RBP4.23□□□□□ -1.73
MDM2-216ENST00000471946 ANAPC4Q9UJX5 808 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 ICKQ9UPZ9 632 aa4.23□□□□□ -1.73
MDM2-216ENST00000471946 MST1RQ04912 1400 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 INO80B-WBP1J3KQ70 363 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 ZC3H11AO75152 810 aaKnown RBP eCLIP4.22□□□□□ -1.73
MDM2-216ENST00000471946 EPN2O95208 641 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 CBX6O95503 412 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 PTPN9P43378 593 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 MTNR1AP48039 350 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 PLCD1P51178 756 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 CCR5P51681 352 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 UBE3AQ05086 875 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 CHRNDQ07001 517 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
MDM2-216ENST00000471946 RAPGEF1Q13905 1077 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 IL13RA2Q14627 380 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 INPP5JQ15735 1006 aaPredicted RBP4.22□□□□□ -1.73
MDM2-216ENST00000471946 ALG10Q5BKT4 473 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 ALG10BQ5I7T1 473 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 WDR45BQ5MNZ6 344 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 KDELC2Q7Z4H8 507 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 SCAIQ8N9R8 606 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 USP38Q8NB14 1042 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 SETD9Q8NE22 299 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 SLC25A28Q96A46 364 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 STN1Q9H668 368 aaKnown RBP4.22□□□□□ -1.73
MDM2-216ENST00000471946 DECR2Q9NUI1 292 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 NLKQ9UBE8 527 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 UPB1Q9UBR1 384 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 CDH22Q9UJ99 828 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 TNFRSF18Q9Y5U5 241 aa4.22□□□□□ -1.73
MDM2-216ENST00000471946 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 TMEM247A6NEH6 219 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 SH2D7A6NKC9 451 aaPredicted RBP4.21□□□□□ -1.74
MDM2-216ENST00000471946 PEX12O00623 359 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 TNFRSF1BP20333 461 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 CD72P21854 359 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 PTGER1P34995 402 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 ALDH7A1P49419 539 aaKnown RBP4.21□□□□□ -1.74
MDM2-216ENST00000471946 PKP1Q13835 747 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 UBAP2Q5T6F2 1119 aaKnown RBP4.21□□□□□ -1.74
MDM2-216ENST00000471946 COLCA1Q6ZS62 124 aa4.21□□□□□ -1.74
MDM2-216ENST00000471946 BBS12Q6ZW61 710 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms