RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 KCNK16Q96T55 309 aa16.85■□□□□ 0.29
HOXB3-205ENST00000470495 FRMD8Q9BZ67 464 aaPredicted RBP16.85■□□□□ 0.29
HOXB3-205ENST00000470495 PRDM12Q9H4Q4 367 aa16.85■□□□□ 0.29
HOXB3-205ENST00000470495 SDR42E2A6NKP2 422 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 LTFP02788 710 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 THOC5Q13769 683 aaKnown RBP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MMEL1Q495T6 779 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MSS51Q4VC12 460 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MARCH8Q5T0T0 291 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 METTL21CQ5VZV1 264 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 NXNQ6DKJ4 435 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 KIAA1841Q6NSI8 718 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 VSTM1Q6UX27 236 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 IPMKQ8NFU5 416 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 ACSS3Q9H6R3 686 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 TMPRSS4Q9NRS4 437 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 FADS3Q9Y5Q0 445 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 POLR2AP24928 1970 aaKnown RBP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 FGFR1P11362 822 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 GEN1Q17RS7 908 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 HSPBAP1Q96EW2 488 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 PHF12Q96QT6 1004 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 KCTD15Q96SI1 283 aaPredicted RBP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 XPO1O14980 1071 aaKnown RBP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CHADO15335 359 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 TPH1P17752 444 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CYP3A5P20815 502 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 FDFT1P37268 417 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CHI3L2Q15782 390 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MAMDC4Q6UXC1 1216 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
HOXB3-205ENST00000470495 ATPAF2Q8N5M1 289 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 RMDN1Q96DB5 314 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MAGEB5Q9BZ81 275 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 ADAMTS10Q9H324 1103 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CYLDQ9NQC7 956 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 CIDEBQ9UHD4 219 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 SLC45A1Q9Y2W3 748 aa16.84■□□□□ 0.29
HOXB3-205ENST00000470495 MYBPHLA2RUH7 354 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 MAGEB3O15480 346 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 WBP4O75554 376 aaKnown RBP16.83■□□□□ 0.29
HOXB3-205ENST00000470495 POLBP06746 335 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 PSMB4P28070 264 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 C21orf62-AS1Q17RA5 79 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 UBR7Q8N806 425 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 OXCT2Q9BYC2 517 aaPredicted RBP16.83■□□□□ 0.29
HOXB3-205ENST00000470495 TKTL2Q9H0I9 626 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 NDE1Q9NXR1 346 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 FIS1Q9Y3D6 152 aa16.83■□□□□ 0.29
HOXB3-205ENST00000470495 SRRM3A6NNA2 597 aaPredicted RBP16.83■□□□□ 0.28
HOXB3-205ENST00000470495 CNOT3O75175 753 aaKnown RBP16.83■□□□□ 0.28
HOXB3-205ENST00000470495 FBXO21O94952 628 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 ATP6V1C1P21283 382 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 NR2C2P49116 596 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 SULT1C3Q6IMI6 304 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 RNF180Q86T96 592 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 ARFGAP1Q8N6T3 406 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 SLC35F5Q8WV83 523 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 SMARCD1Q96GM5 515 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 CCDC177Q9NQR7 707 aaPredicted RBP16.83■□□□□ 0.28
HOXB3-205ENST00000470495 COMMD8Q9NX08 183 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 KLHL41O60662 606 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 KPNA6O60684 536 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 EPN2O95208 641 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 ESRRBO95718 433 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 SOX4Q06945 474 aaPredicted RBP16.83■□□□□ 0.28
HOXB3-205ENST00000470495 SLC1A5Q15758 541 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 FAM35AQ86V20 835 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 MIB1Q86YT6 1006 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 ZNF75CPQ92670 426 aaPredicted RBP16.83■□□□□ 0.28
HOXB3-205ENST00000470495 PMEPA1Q969W9 287 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 C8orf48Q96LL4 319 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 ZNF510Q9Y2H8 683 aa16.83■□□□□ 0.28
HOXB3-205ENST00000470495 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 TSPAN4O14817 238 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 GYG2O15488 501 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 CRHR2Q13324 411 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 C4orf22Q6V702 233 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 ZBTB46Q86UZ6 589 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 ARID3BQ8IVW6 561 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 HPS1Q92902 700 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 ATP6V1E2Q96A05 226 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 PABPC5Q96DU9 382 aaKnown RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 SEPT5Q99719 369 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 DCUN1D5Q9BTE7 237 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 SLC4A5Q9BY07 1137 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 HAO1Q9UJM8 370 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 PMPCBO75439 489 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 ZBTB11O95625 1053 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 FOSL2P15408 326 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 POLR2EP19388 210 aaKnown RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 NCF2P19878 526 aaPredicted RBP16.82■□□□□ 0.28
HOXB3-205ENST00000470495 ABCG1P45844 678 aa16.82■□□□□ 0.28
HOXB3-205ENST00000470495 MOGSQ13724 837 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms