RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SYNPOQ8N3V7 929 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 METTL13Q8N6R0 699 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 SPATA3Q8NHX4 192 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 CHTF18Q8WVB6 975 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 FGF13Q92913 245 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 EVI5LQ96CN4 794 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 PCYT2Q99447 389 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 GCOM2Q9BZD3 368 aaPredicted RBP5.21□□□□□ -1.58
VPS8-219ENST00000469479 SLC32A1Q9H598 525 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 SEC63Q9UGP8 760 aaKnown RBP5.21□□□□□ -1.58
VPS8-219ENST00000469479 MTO1Q9Y2Z2 717 aaKnown RBP5.21□□□□□ -1.58
VPS8-219ENST00000469479 UBIAD1Q9Y5Z9 338 aa5.21□□□□□ -1.58
VPS8-219ENST00000469479 HECTD1Q9ULT8 2610 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 TRIM38O00635 465 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 VTNP04004 478 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 SDSP20132 328 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 CD72P21854 359 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 SMARCA1P28370 1054 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 KIF5BP33176 963 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 RAP2BP61225 183 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 HSD11B2P80365 405 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 SART3Q15020 963 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 KARSQ15046 597 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 ELF2Q15723 593 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 USP41Q3LFD5 358 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 PPM1LQ5SGD2 360 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 KIAA0895LQ68EN5 471 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 TWF2Q6IBS0 349 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 CRELD2Q6UXH1 353 aaPredicted RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 FRMD7Q6ZUT3 714 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 NIPA1Q7RTP0 329 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 C11orf74Q86VG3 221 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 LILRB2Q8N423 598 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 CNNM3Q8NE01 707 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 FAM3CQ92520 227 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 ELSPBP1Q96BH3 223 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 ZBTB10Q96DT7 871 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 RRP36Q96EU6 259 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 ZC3H10Q96K80 434 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 MBOAT7Q96N66 472 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 PIGSQ96S52 555 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 EDEM2Q9BV94 578 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 APOL6Q9BWW8 343 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 VN1R3Q9BXE9 311 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 ARRDC1-AS1Q9H2J1 176 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 BRD9Q9H8M2 597 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 ZNF302Q9NR11 478 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 HEBP1Q9NRV9 189 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 THG1LQ9NWX6 298 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 MAGEC2Q9UBF1 373 aaPredicted RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 MAD2L2Q9UI95 211 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 NDRG2Q9UN36 371 aaKnown RBP5.2□□□□□ -1.58
VPS8-219ENST00000469479 NEDD4P46934 1319 aa5.2□□□□□ -1.58
VPS8-219ENST00000469479 ZMYM2Q9UBW7 1377 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 LAMA4Q16363 1823 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 SMG1Q96Q15 3661 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 ERICH2A1L162 156 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 MEIS2O14770 477 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 ATG13O75143 517 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 OFD1O75665 1012 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 RPP40O75818 363 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 RHOBTB1O94844 696 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 POMCP01189 267 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 CCDC192P0DO97 292 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 GNAQP50148 359 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 MANFP55145 182 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 HAND2P61296 217 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 SSBP2P81877 361 aaPredicted RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 SATB1Q01826 763 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 EIF2B5Q13144 721 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 HNRNPDQ14103 355 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 GRM4Q14833 912 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 IMMTQ16891 758 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 PABPC1LQ4VXU2 614 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 CEP55Q53EZ4 464 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 VPS53Q5VIR6 699 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 ZNF410Q86VK4 478 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 ZNF280BQ86YH2 543 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 TBC1D10CQ8IV04 446 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 SMAP1Q8IYB5 467 aaPredicted RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 HACE1Q8IYU2 909 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 RNF168Q8IYW5 571 aaPredicted RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 LSM14AQ8ND56 463 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 DEPDC1BQ8WUY9 529 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 MAP3K14Q99558 947 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 KXD1Q9BQD3 176 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 MXRA8Q9BRK3 442 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 LZTS2Q9BRK4 669 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 RPP25Q9BUL9 199 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 TRMT61BQ9BVS5 477 aaKnown RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 COLEC11Q9BWP8 271 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 SPZ1Q9BXG8 430 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 ANO3Q9BYT9 981 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 GLT8D2Q9H1C3 349 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 C8orf33Q9H7E9 229 aaPredicted RBP5.19□□□□□ -1.58
VPS8-219ENST00000469479 PSTPIP2Q9H939 334 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 LMAN1LQ9HAT1 526 aa5.19□□□□□ -1.58
VPS8-219ENST00000469479 LY9Q9HBG7 655 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms