RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SLCO1B7G3V0H7 640 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ADRB2P07550 413 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 BMP1P13497 986 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 DSG3P32926 999 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 PRKAA2P54646 552 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 P2RX3P56373 397 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ILF2Q12905 390 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC12A1Q13621 1099 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MAPRE2Q15555 327 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 NEDD8Q15843 81 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 NFE2Q16621 373 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 PGS1Q32NB8 556 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 BOLA3Q53S33 107 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 TMTC4Q5T4D3 741 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MROH9Q5TGP6 573 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ZFPM1Q8IX07 1006 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ZCCHC7Q8N3Z6 543 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MFSD4AQ8N468 514 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 LSMEM1Q8N8F7 131 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MCUQ8NE86 351 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 GRPEL2Q8TAA5 225 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 DEPDC1BQ8WUY9 529 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 AFG1LQ8WV93 481 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SNX19Q92543 992 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ZUFSPQ96AP4 578 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 UIMC1Q96RL1 719 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 TRIT1Q9H3H1 467 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ZBTB26Q9HCK0 441 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SMYD2Q9NRG4 433 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MTRRQ9UBK8 725 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 VTI1BQ9UEU0 232 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF229Q9UJW7 825 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 SARDHQ9UL12 918 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 MINPP1Q9UNW1 487 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 TAF1P21675 1872 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 IGKV6D-41A0A0C4DH26 115 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DLGAP1O14490 977 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SNPHO15079 494 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TRIM24O15164 1050 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CST8O60676 142 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ABCB7O75027 752 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 RFPL2O75678 378 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 NTSR2O95665 410 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 KRT8P05787 483 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GSNP06396 782 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 LDHBP07195 334 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CYP3A4P08684 503 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GNAO1P09471 354 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 AKR1B1P15121 316 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 QARSP47897 775 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 PSME3P61289 254 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CTAG1AP78358 180 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ROR1Q01973 937 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF252P-AS1Q0IIN9 211 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 FCHO2Q0JRZ9 810 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC10A2Q12908 348 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 BFSP2Q13515 415 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ATP6AP1Q15904 470 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 C15orf59Q2T9L4 293 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC9A4Q6AI14 798 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GTF2IRD2BQ6EKJ0 949 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CCSAPQ6IQ19 270 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TATDN1Q6P1N9 297 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DSG4Q86SJ6 1040 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 GTF2IRD2Q86UP8 949 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC51BQ86UW2 128 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 AFAP1L2Q8N4X5 818 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TDRD5Q8NAT2 981 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CMASQ8NFW8 434 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 VPS33AQ96AX1 596 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 PPWD1Q96BP3 646 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 FAF2Q96CS3 445 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ERLEC1Q96DZ1 483 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CLSTN3Q9BQT9 956 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 TRIM15Q9C019 465 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CLPBQ9H078 707 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 DIABLOQ9NR28 239 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CYP26B1Q9NR63 512 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 KCNQ5Q9NR82 932 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 MID2Q9UJV3 735 aa9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 AGO2Q9UKV8 859 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-207ENST00000469334 CNTNAP2Q9UHC6 1331 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms