RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 EXOC1LA0A1B0GW35 172 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 CCDC85CA6NKD9 419 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 ERI2A8K979 691 aaKnown RBP19.37■□□□□ 0.69
SMC4-209ENST00000468653 CLDN11O75508 207 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 AP2A1O95782 977 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 PTPN2P17706 415 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 RENBPP51606 427 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 SLC7A9P82251 487 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 SPARCL1Q14515 664 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 OTOP3Q7RTS5 596 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMC4-209ENST00000468653 ADAMTS19Q8TE59 1207 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 MAML1Q92585 1016 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 CFAP36Q96G28 342 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 GORASP1Q9BQQ3 440 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 STMN4Q9H169 189 aaPredicted RBP19.37■□□□□ 0.69
SMC4-209ENST00000468653 GLOD4Q9HC38 313 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 STOML2Q9UJZ1 356 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 MAD1L1Q9Y6D9 718 aa19.37■□□□□ 0.69
SMC4-209ENST00000468653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 J3KR12 359 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 SCAMP3O14828 347 aaKnown RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 PER2O15055 1255 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 PSMD3O43242 534 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 XYLBO75191 536 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 PFKLP17858 780 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 HOXA9P31269 272 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 ZNF177Q13360 481 aaPredicted RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 SERINC3Q13530 473 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 AGGF1Q8N302 714 aaeCLIP19.36■□□□□ 0.692e-85■■■■■ 286.7
SMC4-209ENST00000468653 FATE1Q969F0 183 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 PABPC5Q96DU9 382 aaKnown RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 CERS4Q9HA82 394 aa19.36■□□□□ 0.69
SMC4-209ENST00000468653 ZC3H7BQ9UGR2 993 aaKnown RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 NYNRINQ9P2P1 1898 aaKnown RBP19.36■□□□□ 0.69
SMC4-209ENST00000468653 MTCL1Q9Y4B5 1905 aaKnown RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 OBSL1O75147 1896 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 SPAG6O75602 509 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 HNRNPA1P09651 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
SMC4-209ENST00000468653 ACVRL1P37023 503 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 PBX2P40425 430 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 ZXDBP98169 803 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 IL10RBQ08334 325 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 HNRNPDQ14103 355 aaKnown RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 STXBP5Q5T5C0 1151 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 MARC1Q5VT66 337 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 TTC39BQ5VTQ0 682 aaPredicted RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 CHST9Q7L1S5 443 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 RBM23Q86U06 439 aaKnown RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 FBF1Q8TES7 1133 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 SIGLEC10Q96LC7 697 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 FCRL5Q96RD9 977 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 MLPHQ9BV36 600 aaPredicted RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 MAGEH1Q9H213 219 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 UBP1Q9NZI7 540 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 CFAP97Q9P2B7 532 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 DPP7Q9UHL4 492 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 ADAM21Q9UKJ8 722 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 AAR2Q9Y312 384 aaKnown RBP19.35■□□□□ 0.69
SMC4-209ENST00000468653 SH3BP1Q9Y3L3 701 aa19.35■□□□□ 0.69
SMC4-209ENST00000468653 A0A1B0GVM2 712 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 TCAF2A6NFQ2 919 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 SDR42E2A6NKP2 422 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 POC1B-GALNT4F8VUJ3 575 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 NRG2O14511 850 aaPredicted RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 ANXA9O76027 345 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 SUN1O94901 812 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 HLA-DQB2P05538 268 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 CCR2P41597 374 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 SGSHP51688 502 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 EPHA5P54756 1037 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 SESN2P58004 480 aaPredicted RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 MAGOHP61326 146 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 GNA12Q03113 381 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 GPR158Q5T848 1215 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 KCTD11Q693B1 232 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 Q6ZNB5 142 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 SHKBP1Q8TBC3 707 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 ARHGEF2Q92974 986 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 ZNF419Q96HQ0 510 aaPredicted RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 PPP1R2P1Q96PQ5 205 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 EBNA1BP2Q99848 306 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 SLC46A2Q9BY10 475 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 LRRC40Q9H9A6 602 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 DNMT3BQ9UBC3 853 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 RABGEF1Q9UJ41 708 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 MYO7AQ13402 2215 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 TYW5A2RUC4 315 aaKnown RBP19.34■□□□□ 0.69
SMC4-209ENST00000468653 CACNG3O60359 315 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 GREM1O60565 184 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 CDH16O75309 829 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 PEX11BO96011 259 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 AGTP01019 485 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 RHOP08100 348 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 RHOCP08134 193 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 NR1D1P20393 614 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 MMP13P45452 471 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 ARHGAP15Q53QZ3 475 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 CASC4Q6P4E1 433 aa19.34■□□□□ 0.69
SMC4-209ENST00000468653 ELMSAN1Q6PJG2 1045 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms