RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 CHSY1Q86X52 802 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 CCAR2Q8N163 923 aaKnown RBP19.21■□□□□ 0.67
LINC00888-201ENST00000468380 OR52K2Q8NGK3 314 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 PRMT1Q99873 361 aaKnown RBP19.21■□□□□ 0.67
LINC00888-201ENST00000468380 PREBQ9HCU5 417 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 NLGN3Q9NZ94 848 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 USP25Q9UHP3 1055 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 COL12A1Q99715 3063 aa19.21■□□□□ 0.67
LINC00888-201ENST00000468380 COL27A1Q8IZC6 1860 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 M0QYV0 167 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 SCAMP1O15126 338 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 FBXO21O94952 628 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 CTSLP07711 333 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 PAEPP09466 180 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 EPB41P11171 864 aaKnown RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 CMA1P23946 247 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 VASPP50552 380 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 YWHAEP62258 255 aaKnown RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 PITX1P78337 314 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 KIF26BQ2KJY2 2108 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 IGF2-ASQ6U949 168 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 Q6ZVU0 165 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 DSG4Q86SJ6 1040 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 SMYD4Q8IYR2 804 aaPredicted RBP19.2■□□□□ 0.66
LINC00888-201ENST00000468380 EXD3Q8N9H8 876 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 IFI44Q8TCB0 444 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 MAPK15Q8TD08 544 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 ATXN7L3BQ96GX2 97 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 CALN1Q9BXU9 219 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 TJP2Q9UDY2 1190 aa19.2■□□□□ 0.66
LINC00888-201ENST00000468380 PTPN13Q12923 2485 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 CASC3O15234 703 aaKnown RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 EFSO43281 561 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 RPL34P49207 117 aaKnown RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 NUCB2P80303 420 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 EIF4EBP2Q13542 120 aaPredicted RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 DCAF17Q5H9S7 520 aaPredicted RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 TCERG1LQ5VWI1 586 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 GCNT7Q6ZNI0 430 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 KAT5Q92993 513 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 FAM149B1Q96BN6 582 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 ZFR2Q9UPR6 939 aaKnown RBP19.19■□□□□ 0.66
LINC00888-201ENST00000468380 PCDHB4Q9Y5E5 795 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 ENTPD2Q9Y5L3 495 aa19.19■□□□□ 0.66
LINC00888-201ENST00000468380 CDRT15L2A8MXV6 281 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 C1QTNF3-AMACRE9PGA6 284 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 CETN3O15182 167 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 IGLV3-25P01717 112 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 ALPPL2P10696 532 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 RBMS1P29558 406 aaKnown RBP19.18■□□□□ 0.66
LINC00888-201ENST00000468380 CSRP3P50461 194 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 DUSP3P51452 185 aaPredicted RBP19.18■□□□□ 0.66
LINC00888-201ENST00000468380 SRSF1Q07955 248 aaKnown RBP eCLIP19.18■□□□□ 0.66
LINC00888-201ENST00000468380 PKP1Q13835 747 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 ATL3Q6DD88 541 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 ABI3BPQ7Z7G0 1075 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 HORMAD1Q86X24 394 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 ERCC4Q92889 916 aaPredicted RBP19.18■□□□□ 0.66
LINC00888-201ENST00000468380 CCDC47Q96A33 483 aaKnown RBP19.18■□□□□ 0.66
LINC00888-201ENST00000468380 ARRDC3Q96B67 414 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 BTN2A3PQ96KV6 586 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 BMFQ96LC9 184 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 FEM1AQ9BSK4 669 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 OR51B4Q9Y5P0 310 aa19.18■□□□□ 0.66
LINC00888-201ENST00000468380 BOD1L1Q8NFC6 3051 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 KCNU1A8MYU2 1149 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 F5H5T6 163 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 ALOX15BO15296 676 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 BNIP3LO60238 219 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 MT-CO1P00395 513 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 APOEP02649 317 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 ZNF18P17022 549 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 GPD2P43304 727 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 IRAK1P51617 712 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 NDUFA8P51970 172 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 CLN3Q13286 438 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 CDKN3Q16667 212 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 SEL1L3Q68CR1 1132 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 NEK5Q6P3R8 708 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 GUSBP11Q6P575 273 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 Q6ZSR6 202 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 PRICKLE2Q7Z3G6 844 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 IFT43Q96FT9 208 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 TRIM4Q9C037 500 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 USP29Q9HBJ7 922 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 DNAJC28Q9NX36 388 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 IL17BQ9UHF5 180 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 KLF15Q9UIH9 416 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 RP1P56715 2156 aa19.17■□□□□ 0.66
LINC00888-201ENST00000468380 CPED1A4D0V7 1026 aa19.16■□□□□ 0.66
LINC00888-201ENST00000468380 NEMP2A6NFY4 417 aa19.16■□□□□ 0.66
LINC00888-201ENST00000468380 TRUB2O95900 331 aaKnown RBP19.16■□□□□ 0.66
LINC00888-201ENST00000468380 HNRNPA2B1P22626 353 aaKnown RBP19.16■□□□□ 0.66
LINC00888-201ENST00000468380 TBXAS1P24557 533 aaPredicted RBP19.16■□□□□ 0.66
LINC00888-201ENST00000468380 AKT2P31751 481 aa19.16■□□□□ 0.66
LINC00888-201ENST00000468380 SYKP43405 635 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms