RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ITGAVP06756 1048 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 TFE3P19532 575 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-206ENST00000466532 CXCR3P49682 368 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 DRAP1Q14919 205 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-206ENST00000466532 SHBQ15464 509 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 DPCR1Q3MIW9 517 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 POM121L1PQ3SYA9 428 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 DPY19L2P1Q6NXN4 242 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 PRPF39Q86UA1 669 aaKnown RBP19.67■□□□□ 0.74
COL9A3-206ENST00000466532 SH2D3CQ8N5H7 860 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 PIP4K2CQ8TBX8 421 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 MDM1Q8TC05 714 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 ANLNQ9NQW6 1124 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 ARHGEF38Q9NXL2 777 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 LHX6Q9UPM6 363 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 FHOD1Q9Y613 1164 aa19.67■□□□□ 0.74
COL9A3-206ENST00000466532 FAM170AA1A519 330 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 TLR4O00206 839 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
COL9A3-206ENST00000466532 MCF2LO15068 1137 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 YKT6O15498 198 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 RHOCP08134 193 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 CYP11B1P15538 503 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 MAT2AP31153 395 aaKnown RBP19.66■□□□□ 0.74
COL9A3-206ENST00000466532 CDH5P33151 784 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-206ENST00000466532 NXPH1P58417 271 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 DEUP1Q05D60 604 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 KCNMA1Q12791 1236 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 CNTN1Q12860 1018 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 ALFQ53S48 1182 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 FAM102AQ5T9C2 384 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-206ENST00000466532 AGBL4Q5VU57 503 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 NAPEPLDQ6IQ20 393 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 MARCH9Q86YJ5 346 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 C18orf8Q96DM3 657 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 DACH1Q9UI36 760 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 PPM1HQ9ULR3 514 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 SNX10Q9Y5X0 201 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 CHD5Q8TDI0 1954 aa19.66■□□□□ 0.74
COL9A3-206ENST00000466532 ARID1BQ8NFD5 2236 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-206ENST00000466532 NBEAQ8NFP9 2946 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 TRPM6Q9BX84 2022 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 I6L893 689 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-206ENST00000466532 F9P00740 461 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 SRCP12931 536 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ERCC5P28715 1186 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-206ENST00000466532 GABRB2P47870 512 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ARRB1P49407 418 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-206ENST00000466532 KRT83P78385 493 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 TAF3Q5VWG9 929 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 DHRS13Q6UX07 377 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ERICH1Q86X53 443 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 MFSD2AQ8NA29 543 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 SAP25Q8TEE9 199 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 NT5C3BQ969T7 300 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 PGAP3Q96FM1 320 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-206ENST00000466532 TBCBQ99426 244 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 PSMB7Q99436 277 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 C2orf49Q9BVC5 232 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ARHGAP20Q9P2F6 1191 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 HS3ST2Q9Y278 367 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 PAXBP1Q9Y5B6 917 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ACACAQ13085 2346 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 ZFYVE26Q68DK2 2539 aa19.65■□□□□ 0.74
COL9A3-206ENST00000466532 FAM149AA5PLN7 773 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 CBX4O00257 560 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 ENC1O14682 589 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 SNAP91O60641 907 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 MT-CO1P00395 513 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 EPHA8P29322 1005 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-206ENST00000466532 NUDT1P36639 197 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 SCNN1AP37088 669 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 SMAD1Q15797 465 aaKnown RBP19.64■□□□□ 0.73
COL9A3-206ENST00000466532 SLC25A52Q3SY17 297 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 LRRC31Q6UY01 552 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 TRIM69Q86WT6 500 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 XYLT1Q86Y38 959 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 ZNF683Q8IZ20 524 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 OXR1Q8N573 874 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 EID2Q8N6I1 236 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 ATP11CQ8NB49 1132 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 CNDP2Q96KP4 475 aaKnown RBP19.64■□□□□ 0.73
COL9A3-206ENST00000466532 TMPRSS4Q9NRS4 437 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 VPS51Q9UID3 782 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 DMTF1Q9Y222 760 aa19.64■□□□□ 0.73
COL9A3-206ENST00000466532 FARP1Q9Y4F1 1045 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-206ENST00000466532 ITPR1Q14643 2758 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 LDOC1O95751 146 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-206ENST00000466532 C2CD6Q53TS8 623 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 TFAP2DQ7Z6R9 452 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 SETD3Q86TU7 594 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-206ENST00000466532 SPATS2Q86XZ4 545 aaKnown RBP19.63■□□□□ 0.73
COL9A3-206ENST00000466532 CCDC114Q96M63 670 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 NAA15Q9BXJ9 866 aaKnown RBP19.63■□□□□ 0.73
COL9A3-206ENST00000466532 NUP62CLQ9H1M0 184 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 ERVMER34-1Q9H9K5 563 aa19.63■□□□□ 0.73
COL9A3-206ENST00000466532 SAMSN1Q9NSI8 373 aaKnown RBP19.63■□□□□ 0.73
COL9A3-206ENST00000466532 MPP6Q9NZW5 540 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms