RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 CYP4F11Q9HBI6 524 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 DLGAP2Q9P1A6 1054 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 SCOCQ9UIL1 159 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 TSC2P49815 1807 aa18.68■□□□□ 0.58
SYNE4-204ENST00000465425 LOC100653049A0A140TA62 436 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 MEIS3P2A8K0S8 358 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TMEM114B3SHH9 223 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 G3V2L1 256 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 KRT34O76011 436 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 LRIG2O94898 1065 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 JCHAINP01591 159 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 LINGO3P0C6S8 592 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 CACNA2D1P54289 1103 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 DSG1Q02413 1049 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 PPP2R5DQ14738 602 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TMCO4Q5TGY1 634 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.67■□□□□ 0.58
SYNE4-204ENST00000465425 OR6Y1Q8NGX8 325 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TEKT5Q96M29 485 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 OXCT2Q9BYC2 517 aaPredicted RBP18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TMEM30AQ9NV96 361 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 CPSF2Q9P2I0 782 aaKnown RBP18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TLK1Q9UKI8 766 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 CDH9Q9ULB4 789 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 SLC39A10Q9ULF5 831 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 GOLGA8TH3BQL2 631 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 M0QZ92 97 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 AAGABQ6PD74 315 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 NAPRTQ6XQN6 538 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 TDRD5Q8NAT2 981 aaKnown RBP18.67■□□□□ 0.58
SYNE4-204ENST00000465425 AGR3Q8TD06 166 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
SYNE4-204ENST00000465425 GAD1Q99259 594 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 MAN1C1Q9NR34 630 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 NSMCE4AQ9NXX6 385 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 SNX10Q9Y5X0 201 aa18.67■□□□□ 0.58
SYNE4-204ENST00000465425 E9PBE3 544 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 KLHL41O60662 606 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 UPP2O95045 317 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 APOA4P06727 396 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 SAT1P21673 171 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 HADHAP40939 763 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 EPGNQ6UW88 154 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 IZUMO2Q6UXV1 221 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 LINC00523Q86TU6 105 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 KBTBD2Q8IY47 623 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 ACTRT2Q8TDY3 377 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 TASP1Q9H6P5 420 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 PPM1HQ9ULR3 514 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CCNT2O60583 730 aaKnown RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 NMBRP28336 390 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 PCSK1P29120 753 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CXCR3P49682 368 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 MAP2K5Q13163 448 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CUL3Q13618 768 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 ANO4Q32M45 955 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 RWDD4Q6NW29 188 aaKnown RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 APLFQ8IW19 511 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CCDC124Q96CT7 223 aaKnown RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 PPP1R12CQ9BZL4 782 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 ILKAPQ9H0C8 392 aaPredicted RBP18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CDH22Q9UJ99 828 aa18.66■□□□□ 0.58
SYNE4-204ENST00000465425 CCDC78A2IDD5 438 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 SRGAP2BP0DMP2 458 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 DNAJB2P25686 324 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 COG7P83436 770 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 IRF5Q13568 498 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 DCLRE1AQ6PJP8 1040 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 DEFB107AQ8IZN7 70 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 SLC26A7Q8TE54 656 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 APBA2Q99767 749 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 YIPF3Q9GZM5 350 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 FAM105AQ9NUU6 356 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 TRIP12Q14669 1992 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-204ENST00000465425 PDE5AO76074 875 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 TUBP50607 506 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 SLC9B1Q4ZJI4 515 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 METTL21CQ5VZV1 264 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 TAF2Q6P1X5 1199 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 USP33Q8TEY7 942 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 PYDC1Q8WXC3 89 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 JADE3Q92613 823 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 ACE2Q9BYF1 805 aaPredicted RBP18.65■□□□□ 0.58
SYNE4-204ENST00000465425 SPON1Q9HCB6 807 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 S100A14Q9HCY8 104 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 TCF7L2Q9NQB0 619 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 OXSMQ9NWU1 459 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 FLRT1Q9NZU1 646 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 ANKRD6Q9Y2G4 727 aa18.65■□□□□ 0.58
SYNE4-204ENST00000465425 MAGEA13PA6NCF6 341 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 HHLA1C9JL84 531 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 DFFAO00273 331 aa18.64■□□□□ 0.57
SYNE4-204ENST00000465425 PSMD3O43242 534 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms