RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LRRC57Q8N9N7 239 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 OR7D4Q8NG98 312 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 FAF2Q96CS3 445 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 MYO19Q96H55 970 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 SPON2Q9BUD6 331 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 NOL6Q9H6R4 1146 aaKnown RBP17.34■□□□□ 0.37
USP39-211ENST00000465282 VPS51Q9UID3 782 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 CCDC66A2RUB6 948 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 GRID2IPA4D2P6 1211 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 WASH3PC4AMC7 463 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 RASA4BC9J798 803 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 CBX4O00257 560 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 RASA4O43374 803 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 KDELR3O43731 214 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 ATP9BO43861 1147 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 ZMPSTE24O75844 475 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 EPHX1P07099 455 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 C7P10643 843 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 TDGF1P13385 188 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 COL9A1P20849 921 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 PRKCHP24723 683 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 CTSOP43234 321 aaPredicted RBP17.33■□□□□ 0.36
USP39-211ENST00000465282 PTPN5P54829 565 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 SERINC3Q13530 473 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 CAMK2GQ13555 558 aaPredicted RBP17.33■□□□□ 0.36
USP39-211ENST00000465282 HNRNPA1L2Q32P51 320 aaKnown RBP17.33■□□□□ 0.36
USP39-211ENST00000465282 ANKRD20A8PQ5CZ79 823 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 AFMIDQ63HM1 303 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 KATNAL2Q8IYT4 538 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 SH2D3CQ8N5H7 860 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 CASKIN2Q8WXE0 1202 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 NELL1Q92832 810 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 KLC2Q9H0B6 622 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 CD248Q9HCU0 757 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 ZDHHC4Q9NPG8 344 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 C2orf42Q9NWW7 574 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 AMFRQ9UKV5 643 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 PPP2R2CQ9Y2T4 447 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 PCDHA3Q9Y5H8 950 aa17.33■□□□□ 0.36
USP39-211ENST00000465282 NYNRINQ9P2P1 1898 aaKnown RBP17.33■□□□□ 0.36
USP39-211ENST00000465282 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 LRRD1A4D1F6 860 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 MIF4GDA9UHW6 222 aaKnown RBP17.32■□□□□ 0.36
USP39-211ENST00000465282 CD48P09326 243 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 SP9P0CG40 484 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 AMPD1P23109 780 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 CTNNA1P35221 906 aaKnown RBP17.32■□□□□ 0.36
USP39-211ENST00000465282 ACVRL1P37023 503 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 WASP42768 502 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 RASSF3Q86WH2 238 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 RCOR2Q8IZ40 523 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 EXD1Q8NHP7 514 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 RAPGEF5Q92565 580 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 RPL10LQ96L21 214 aaKnown RBP17.32■□□□□ 0.36
USP39-211ENST00000465282 RNF157Q96PX1 679 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 CEP44Q9C0F1 390 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 SLCO3A1Q9UIG8 710 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
USP39-211ENST00000465282 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 SNAP91O60641 907 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 PALMO75781 387 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 ZRANB2O95218 330 aaKnown RBP eCLIP17.31■□□□□ 0.36
USP39-211ENST00000465282 KRT1P04264 644 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 ZFXP17010 805 aaPredicted RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 CTNNA2P26232 953 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 CNR2P34972 360 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 SERPINH1P50454 418 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 COPS2P61201 443 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 ARF5P84085 180 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 MMRN1Q13201 1228 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 PAFAH1B3Q15102 231 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 TAZQ16635 292 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 INO80DQ53TQ3 878 aaPredicted RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 ZC3H14Q6PJT7 736 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 PEX26Q7Z412 305 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 NT5DC3Q86UY8 548 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 LONP2Q86WA8 852 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 ATP11CQ8NB49 1132 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 PCDH19Q8TAB3 1148 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 RBM41Q96IZ5 413 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 CCDC114Q96M63 670 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 HHIPQ96QV1 700 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
USP39-211ENST00000465282 GOLPH3Q9H4A6 298 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
USP39-211ENST00000465282 EML5Q05BV3 1969 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 PLXND1Q9Y4D7 1925 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 A0A0U1RQJ8 604 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TCRBV21S2A2A0A5A6 115 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 C3orf70A6NLC5 250 aaPredicted RBP17.3■□□□□ 0.36
USP39-211ENST00000465282 SRCP12931 536 aa17.3■□□□□ 0.36
USP39-211ENST00000465282 TNNT1P13805 278 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms