RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 RASA4O43374 803 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 PALMO75781 387 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 HOXB2P14652 356 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 MARCKSL1P49006 195 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 VASPP50552 380 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-204ENST00000463908 YBEYP58557 167 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-204ENST00000463908 ARF5P84085 180 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 FNDC3BQ53EP0 1204 aaKnown RBP19.38■□□□□ 0.69
LMNB1-204ENST00000463908 ANKRD20A8PQ5CZ79 823 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 IL31Q6EBC2 164 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 SERPINA13PQ6UXR4 307 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 LINGO4Q6UY18 593 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 ARHGAP12Q8IWW6 846 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 NPWQ8N729 165 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 DCAF4L2Q8NA75 395 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 KDM1BQ8NB78 822 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 KRT35Q92764 455 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 NELL1Q92832 810 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 FAF2Q96CS3 445 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 CELF6Q96J87 481 aaKnown RBP19.38■□□□□ 0.69
LMNB1-204ENST00000463908 HHIPQ96QV1 700 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 CALN1Q9BXU9 219 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 ATP13A1Q9HD20 1204 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 GUCA1BQ9UMX6 200 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 ACTL7AQ9Y615 435 aa19.38■□□□□ 0.69
LMNB1-204ENST00000463908 K7ERQ8 282 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 CBX4O00257 560 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 KDELR3O43731 214 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 NRDCO43847 1150 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 SP9P0CG40 484 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 HOXA6P31267 233 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 PXNP49023 591 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-204ENST00000463908 DGKEP52429 567 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 NDST2P52849 883 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 E2F5Q15329 346 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 NT5DC3Q86UY8 548 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 CAMKK1Q8N5S9 505 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 PQLC3Q8N755 202 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 FRS2Q8WU20 508 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 RNF25Q96BH1 459 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-204ENST00000463908 HMCESQ96FZ2 354 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 ZNF670Q9BS34 389 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 C2orf49Q9BVC5 232 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-204ENST00000463908 CAPN6Q9Y6Q1 641 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 CACNA1IQ9P0X4 2223 aa19.37■□□□□ 0.69
LMNB1-204ENST00000463908 MYO18AQ92614 2054 aaKnown RBP19.37■□□□□ 0.69
LMNB1-204ENST00000463908 MUC22E2RYF6 1773 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-204ENST00000463908 LRRD1A4D1F6 860 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 H0Y858 1186 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 SMAD6O43541 496 aaKnown RBP19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PSTPIP1O43586 416 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 KRT86O43790 486 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 ATP9BO43861 1147 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 EPHX1P07099 455 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 SRCP12931 536 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PEX5P50542 639 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 ST8SIA6P61647 398 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 CCDC173Q0VFZ6 552 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 SERINC3Q13530 473 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 TAZQ16635 292 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 IFI16Q16666 785 aaKnown RBP19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PARP15Q460N3 678 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 ZFYVE27Q5T4F4 411 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 MAP7D3Q8IWC1 876 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 SH2D3CQ8N5H7 860 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PTPRN2Q92932 1015 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 RNF157Q96PX1 679 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 TSGA10Q9BZW7 698 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 LZTFL1Q9NQ48 299 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PRSS16Q9NQE7 514 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 DDX56Q9NY93 547 aaKnown RBP19.36■□□□□ 0.69
LMNB1-204ENST00000463908 DONSONQ9NYP3 566 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 HS3ST2Q9Y278 367 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 PCDHA3Q9Y5H8 950 aa19.36■□□□□ 0.69
LMNB1-204ENST00000463908 ZNF821O75541 412 aaPredicted RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 KRT1P04264 644 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 VAV1P15498 845 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 CTNNA1P35221 906 aaKnown RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 ETFBP38117 255 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 PAPOLAP51003 745 aaKnown RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 CAMK2GQ13555 558 aaPredicted RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 HNRNPA1L2Q32P51 320 aaKnown RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 ZNF528Q3MIS6 628 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 C9orf64Q5T6V5 341 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 MFSD7Q6UXD7 560 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 LEKR1Q6ZMV7 388 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 RASSF3Q86WH2 238 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 KATNAL2Q8IYT4 538 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 LZTR1Q8N653 840 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 TSTD1Q8NFU3 115 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 POLMQ9NP87 494 aaPredicted RBP19.35■□□□□ 0.69
LMNB1-204ENST00000463908 EBF1Q9UH73 591 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 SUN2Q9UH99 717 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 SLC25A13Q9UJS0 675 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 DMDP11532 3685 aa19.35■□□□□ 0.69
LMNB1-204ENST00000463908 TCRBV21S2A2A0A5A6 115 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 ZNF487B1APH4 448 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 J3KR12 359 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 APBB3O95704 486 aa19.34■□□□□ 0.69
LMNB1-204ENST00000463908 GABRG2P18507 467 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms