RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CCDC33Q8N5R6 958 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 NETO2Q8NC67 525 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ALG3Q92685 438 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 HMCESQ96FZ2 354 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 MYO19Q96H55 970 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 RPL10LQ96L21 214 aaKnown RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 MRGPRX3Q96LB0 322 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 LRFN3Q9BTN0 628 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 SLC39A8Q9C0K1 460 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 POLR3BQ9NW08 1133 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 C2orf42Q9NWW7 574 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 VPS51Q9UID3 782 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 SLC25A13Q9UJS0 675 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 MMP17Q9ULZ9 603 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 STON1Q9Y6Q2 735 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ATG2BQ96BY7 2078 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 MUC22E2RYF6 1773 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ADAM23O75077 832 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ZMPSTE24O75844 475 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SERPINB6P35237 376 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 PAPOLAP51003 745 aaKnown RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 DNA2P51530 1060 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ST8SIA6P61647 398 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SERINC3Q13530 473 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ENPP2Q13822 863 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 PAFAH1B3Q15102 231 aaKnown RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 TAZQ16635 292 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 TFDP3Q5H9I0 405 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 EOGTQ5NDL2 527 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 MEI1Q5TIA1 1274 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SERPINA13PQ6UXR4 307 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 LINGO4Q6UY18 593 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SYT13Q7L8C5 426 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 RFX6Q8HWS3 928 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 TP53INP2Q8IXH6 220 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 PLD5Q8N7P1 536 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 KDM1BQ8NB78 822 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 DTWD2Q8NBA8 298 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 GABRG3Q99928 467 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 MAK16Q9BXY0 300 aaKnown RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 TMEM245Q9H330 911 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SPATA6Q9NWH7 488 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-221ENST00000462352 SLCO3A1Q9UIG8 710 aa12.06□□□□□ -0.48
CPNE1-221ENST00000462352 CHD5Q8TDI0 1954 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 GOLGA6L9A6NEM1 432 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 DFFAO00273 331 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 APOL1O14791 398 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 KDELR3O43731 214 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 MFSD11O43934 449 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 MT-CO1P00395 513 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 EPHX1P07099 455 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 PYGMP11217 842 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 KRT10P13645 584 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 HLA-EP13747 358 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 HOXB2P14652 356 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 PRKCHP24723 683 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 NNMTP40261 264 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 CXCL12P48061 93 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-221ENST00000462352 CCR3P51677 355 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 COPS2P61201 443 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 ARF5P84085 180 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 SATB1Q01826 763 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 ADCY2Q08462 1091 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 LLGL1Q15334 1064 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 CRY1Q16526 586 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 PPP2R5EQ16537 467 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 KAZNQ674X7 775 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 RETSATQ6NUM9 610 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF366Q8N895 744 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 PRDM16Q9HAZ2 1276 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 HPCAL4Q9UM19 191 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 HS3ST2Q9Y278 367 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 ACTL7AQ9Y615 435 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 RAD54BQ9Y620 910 aa12.05□□□□□ -0.48
CPNE1-221ENST00000462352 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 KMT2EQ8IZD2 1858 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 CXorf51AA0A1B0GTR3 108 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 A0A1W2PQF6 199 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ZSCAN5CA6NGD5 496 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-221ENST00000462352 TTC34A8MYJ7 566 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 J3KR12 359 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 LAMTOR5O43504 91 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ATP9BO43861 1147 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 KIF5CO60282 957 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 CST8O60676 142 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 CD160O95971 181 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 SRCP12931 536 aa12.04□□□□□ -0.48
CPNE1-221ENST00000462352 ZFXP17010 805 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms