RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 SFTPA1Q8IWL2 248 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ADHFE1Q8IWW8 467 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 CCDC105Q8IYK2 499 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ZNF419Q96HQ0 510 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 FRMD8P1Q9BZ68 369 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 SEPT10Q9P0V9 454 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 KIAA1549LQ6ZVL6 1849 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 BCLAF3A2AJT9 711 aaKnown RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 CBX4O00257 560 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 KCNN4O15554 427 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 SLU7O95391 586 aaKnown RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ITGAVP06756 1048 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 CISD3P0C7P0 127 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 PABPC1P11940 636 aaKnown RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ETS1P14921 441 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 DGKGP49619 791 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 CLCN6P51797 869 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 OXCT1P55809 520 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ZBTB17Q13105 803 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 PLEKHG6Q3KR16 790 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 LINGO4Q6UY18 593 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 BZW1Q7L1Q6 419 aaKnown RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 CCDC13Q8IYE1 715 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 XPO6Q96QU8 1125 aaKnown RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 ACE2Q9BYF1 805 aaPredicted RBP13.78□□□□□ -0.2
PBRM1-219ENST00000462207 SP110Q9HB58 689 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 VPS51Q9UID3 782 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 FBXO10Q9UK96 956 aa13.78□□□□□ -0.2
PBRM1-219ENST00000462207 SHROOM3Q8TF72 1996 aa13.77□□□□□ -0.2
PBRM1-219ENST00000462207 HACD1B0YJ81 288 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 SGK1O00141 431 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 NCAM2O15394 837 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 TTI1O43156 1089 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 RAD51CO43502 376 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 PRAMEF11O60813 436 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 PEX11BO96011 259 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 ZSCAN5DPP0CG00 497 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 PTGIRP43119 386 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 CTSOP43234 321 aaPredicted RBP13.77□□□□□ -0.21
PBRM1-219ENST00000462207 ARF5P84085 180 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 NR1H3Q13133 447 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 ZNF783Q6ZMS7 281 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 ALLCQ8N6M5 410 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.77□□□□□ -0.21
PBRM1-219ENST00000462207 DCAF4L2Q8NA75 395 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 CSGALNACT1Q8TDX6 532 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 TSGA13Q96PP4 275 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 PDFQ9HBH1 243 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
PBRM1-219ENST00000462207 RNF103O00237 685 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 KDELR3O43731 214 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ZMPSTE24O75844 475 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ECEL1O95672 775 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 IFNB1P01574 187 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 DR1Q01658 176 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 WASHC5Q12768 1159 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 TEX35Q5T0J7 233 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 HEATR6Q6AI08 1181 aaKnown RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 GRAMD4Q6IC98 578 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 GSTA5Q7RTV2 222 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ADIPOR2Q86V24 386 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 PHTF2Q8N3S3 785 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 SORCS1Q8WY21 1168 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 LRRC1Q9BTT6 524 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 V9GYY5 206 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 MIA3Q5JRA6 1907 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ANTXRLA6NF34 631 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 F5H423 210 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 CCNCP24863 283 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 PTPN3P26045 913 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ETFBP38117 255 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 VPS41P49754 854 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 STK19P49842 368 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 IL10RBQ08334 325 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 KIAA0907Q7Z7F0 614 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 JAMLQ86YT9 394 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
PBRM1-219ENST00000462207 ATL2Q8NHH9 583 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 HINFPQ9BQA5 517 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
PBRM1-219ENST00000462207 DRG1Q9Y295 367 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms