RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 LGMNQ99538 433 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 CIPCQ9C0C6 399 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 MKRN2Q9H000 416 aaKnown RBP5.3□□□□□ -1.56
BRCA1-206ENST00000461574 IKZF4Q9H2S9 585 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 PDE11AQ9HCR9 933 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 ITM2CQ9NQX7 267 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 TBC1D7Q9P0N9 293 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 GMIPQ9P107 970 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 USP36Q9P275 1121 aaKnown RBP5.3□□□□□ -1.56
BRCA1-206ENST00000461574 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-206ENST00000461574 LIMCH1Q9UPQ0 1083 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 STYXL1Q9Y6J8 313 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 UBR5O95071 2799 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-206ENST00000461574 PLXNA2O75051 1894 aa5.3□□□□□ -1.56
BRCA1-206ENST00000461574 A8MXQ7 604 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 KCNJ18B7U540 433 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 H3BQV1 296 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CLDN5O00501 218 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 KCNK3O14649 394 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 NPC1O15118 1278 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ARHGAP6O43182 974 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SLC26A4O43511 780 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TLX3O43711 291 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TLR5O60602 858 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 PGRP06401 933 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 EPHX1P07099 455 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ZGLP1P0C6A0 271 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CDK4P11802 303 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TRIM21P19474 475 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ADSSP30520 456 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ACTN2P35609 894 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ETV3P41162 512 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TUBP50607 506 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF132P52740 706 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SLC5A3P53794 718 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CACNA2D1P54289 1103 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CLDN6P56747 220 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 BNC1Q01954 994 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ST3GAL1Q11201 340 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TARDBPQ13148 414 aaKnown RBP eCLIP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SURF1Q15526 300 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 KIF19Q2TAC6 998 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 L1TD1Q5T7N2 865 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ARL6IP4Q66PJ3 421 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 LAYNQ6UX15 382 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF720Q7Z2F6 126 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TMPRSS6Q8IU80 811 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 GPD1LQ8N335 351 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 B3GALNT2Q8NCR0 500 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 RAD54LQ92698 747 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 FGF11Q92914 225 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SKA1Q96BD8 255 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SMARCD1Q96GM5 515 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CNDP2Q96KP4 475 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 MRPL45Q9BRJ2 306 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ACE2Q9BYF1 805 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TRIM9Q9C026 710 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 PCED1AQ9H1Q7 454 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 DPEP3Q9H4B8 488 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ST6GALNAC4Q9H4F1 302 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 PCIF1Q9H4Z3 704 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 DMAP1Q9NPF5 467 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TLR8Q9NR97 1041 aaKnown RBP5.29□□□□□ -1.56
BRCA1-206ENST00000461574 PLK2Q9NYY3 685 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SEL1LQ9UBV2 794 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 SIX4Q9UIU6 781 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 ANKRD6Q9Y2G4 727 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 CABIN1Q9Y6J0 2220 aa5.29□□□□□ -1.56
BRCA1-206ENST00000461574 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 MYOCOSA0A1B0GUC4 107 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 FAM47DPA6NHR8 397 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF233A6NK53 670 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 H0Y8X5 98 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 PYCARD-AS1I3L0S3 204 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 PCDHGA12O60330 932 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DFNA5O60443 496 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 BRINP1O60477 761 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 FSBPO95073 299 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 LDOC1O95751 146 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 SEMA4FO95754 770 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DNTTP04053 509 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 CYBBP04839 570 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ITGAVP06756 1048 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DLATP10515 647 aaKnown RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 IDEP14735 1019 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 GAP43P17677 238 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TNNI1P19237 187 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 GARTP22102 1010 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ATP5C1P36542 298 aaKnown RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 IL12RB1P42701 662 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 BCAT1P54687 386 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 UCNP55089 124 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TMPRSS3P57727 454 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 RPS26P62854 115 aaKnown RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DLG4P78352 724 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 RHDQ02161 417 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms