RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 OFCC1Q8IZS5 231 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 SYT15Q9BQS2 421 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 UBP1Q9NZI7 540 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 GIT1Q9Y2X7 761 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 GMPPBQ9Y5P6 360 aa9.13□□□□□ -0.95
BRCA1-205ENST00000461221 GPC6Q9Y625 555 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-205ENST00000461221 PTPN1P18031 435 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CBX5P45973 191 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NPTX2P47972 431 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 UGT2B15P54855 530 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 USP46P62068 366 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 FCHO2Q0JRZ9 810 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 GRB10Q13322 594 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SETMARQ53H47 684 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF549Q6P9A3 640 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 TMC7Q7Z402 723 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ABRAQ8N0Z2 381 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ACTL9Q8TC94 416 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 WDR60Q8WVS4 1066 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PRCCQ92733 491 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 EXO5Q9H790 373 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 L2HGDHQ9H9P8 463 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ELL3Q9HB65 397 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 TOR4AQ9NXH8 423 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CCDC167Q9P0B6 97 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 C3orf18Q9UK00 162 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF609O15014 1411 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ALDH2P05091 517 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CHRNGP07510 517 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 MYL6P60660 151 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ARMC12Q5T9G4 340 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 FAM171BQ6P995 826 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ABRAXAS1Q6UWZ7 409 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PLEKHH3Q7Z736 793 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SMARCD1Q96GM5 515 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 BTBD9Q96Q07 612 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 MGAT4AQ9UM21 535 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 REREQ9P2R6 1566 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF879B4DU55 563 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 LIN7AO14910 233 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PRODHO43272 600 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PRMT3O60678 531 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 HOXB6P17509 224 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 UGT1A5P35504 534 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 MYBPC1Q00872 1141 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 DGCR6Q14129 220 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ATG9AQ7Z3C6 839 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 HIPK1Q86Z02 1210 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 VCPIP1Q96JH7 1222 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CATSPERZQ9NTU4 200 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ARL15Q9NXU5 204 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 DDX43Q9NXZ2 648 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 FAM92AA1XBS5 289 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 URADA6NGE7 173 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SNAP91O60641 907 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PSMG1O95456 288 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ANXA5P08758 320 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 RPL4P36578 427 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 IDH2P48735 452 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ACTR3P61158 418 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NR1D2Q14995 579 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 RABL6Q3YEC7 729 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SEZ6Q53EL9 994 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 BICRALQ6AI39 1079 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PAGE2Q7Z2X7 111 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NET1Q7Z628 596 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NKAPQ8N5F7 415 aaKnown RBP9.12□□□□□ -0.95
BRCA1-205ENST00000461221 POC5Q8NA72 575 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF248Q8NDW4 579 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 NELL1Q92832 810 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 MROH8Q9H579 483 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 PLGRKTQ9HBL7 147 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CCNB1IP1Q9NPC3 277 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 SPATA31A3Q5VYP0 1347 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
BRCA1-205ENST00000461221 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 IL12AP29459 219 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 RPL9P32969 192 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TUBP50607 506 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ACAP1Q15027 740 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 LENG9Q96B70 501 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 SEMA6AQ9H2E6 1030 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CRISPLD1Q9H336 500 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 LEF1Q9UJU2 399 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 MRPS7Q9Y2R9 242 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TMA7Q9Y2S6 64 aaKnown RBP9.11□□□□□ -0.95
BRCA1-205ENST00000461221 ZBTB22O15209 634 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 TMCC2O75069 709 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 XYLBO75191 536 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 LCA5LO95447 670 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 BMP7P18075 431 aa9.11□□□□□ -0.95
BRCA1-205ENST00000461221 CAPGP40121 348 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms