RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NT5C3BQ969T7 300 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 SGSM3Q96HU1 749 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 FUBP3Q96I24 572 aaKnown RBP eCLIP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 TMEM109Q9BVC6 243 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 SMG5Q9UPR3 1016 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 H0Y626 953 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 PHGDHO43175 533 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 FAM163BP0C2L3 166 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 GCAP28676 217 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC11A2P49281 568 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 CDK7P50613 346 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 SMAD3P84022 425 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 DLG2Q15700 870 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 BRMS1LQ5PSV4 323 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 TBC1D1Q86TI0 1168 aaPredicted RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 RBM23Q86U06 439 aaKnown RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 CNTD1Q8N815 330 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 PTPRN2Q92932 1015 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 OXNAD1Q96HP4 312 aaPredicted RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 IGSF21Q96ID5 467 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 SMOC2Q9H3U7 446 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 LRRC40Q9H9A6 602 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 ZNF358Q9NW07 568 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 PHTF1Q9UMS5 762 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 USP3Q9Y6I4 520 aa9.54□□□□□ -0.88
NUDCD3-203ENST00000460110 A0A0D9SEW6 157 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 TNFRSF10BO14763 440 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 HDCP19113 662 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 NMBRP28336 390 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 GLUD2P49448 558 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SEMA5AQ13591 1074 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 PAFAH1B3Q15102 231 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 MS4A13Q5J8X5 152 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 CCDC117Q8IWD4 279 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 KIF2BQ8N4N8 673 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 DCLK2Q8N568 766 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ARL14EPQ8N8R7 260 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SLC44A1Q8WWI5 657 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 TEKT5Q96M29 485 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ZNF395Q9H8N7 513 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ENTPD7Q9NQZ7 604 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ABCF3Q9NUQ8 709 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SENP1Q9P0U3 644 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 TLK1Q9UKI8 766 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SCML2Q9UQR0 700 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 C2orf78A6NCI8 922 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 C2orf71A6NGG8 1288 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 MTSS1O43312 755 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 GJB3O75712 270 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 HLA-DQB2P05538 268 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ARL1P40616 181 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 PRAMEP78395 509 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 PPIDQ08752 370 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 USP10Q14694 798 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 CHI3L2Q15782 390 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ACCSLQ4AC99 568 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ARCQ7LC44 396 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 DCAKDQ8WVC6 231 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 CKAP2Q8WWK9 683 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 APBB2Q92870 758 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 OLFM3Q96PB7 478 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SEMA3CQ99985 751 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 CORO1BQ9BR76 489 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 SMG9Q9H0W8 520 aaKnown RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 USP15Q9Y4E8 981 aaPredicted RBP9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 COMMD10Q9Y6G5 202 aa9.53□□□□□ -0.88
NUDCD3-203ENST00000460110 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 TPP1O14773 563 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 SPAG6O75602 509 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 SEC24AO95486 1093 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 GABRR2P28476 465 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 CD68P34810 354 aaPredicted RBP9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 EPHB1P54762 984 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 WNT3AP56704 352 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 CYP4F8P98187 520 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 CDH17Q12864 832 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 ZNF177Q13360 481 aaPredicted RBP9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 LRRC26Q2I0M4 334 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 ADGRD1Q6QNK2 874 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 KCNMB4Q86W47 210 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 DDI1Q8WTU0 396 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 CERS2Q96G23 380 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 TM6SF2Q9BZW4 377 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 MANSC1Q9H8J5 431 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 ATP13A1Q9HD20 1204 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.88
NUDCD3-203ENST00000460110 CXCL14O95715 111 aa9.52□□□□□ -0.89
NUDCD3-203ENST00000460110 LRG1P02750 347 aa9.52□□□□□ -0.89
NUDCD3-203ENST00000460110 PGAM1P18669 254 aa9.52□□□□□ -0.89
NUDCD3-203ENST00000460110 ATF6P18850 670 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms