RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SLC6A17Q9H1V8 727 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 LRRC19Q9H756 370 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 RCOR3Q9P2K3 495 aaPredicted RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ACTL7AQ9Y615 435 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 ALG6Q9Y672 507 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 MUC6Q6W4X9 2439 aa13.13□□□□□ -0.31
COL18A1-206ENST00000459895 TNRC6BQ9UPQ9 1833 aaKnown RBP13.13□□□□□ -0.31
COL18A1-206ENST00000459895 VPS13AQ96RL7 3174 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 RASA4BC9J798 803 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 K7ERQ8 282 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 RASA4O43374 803 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 TIMM44O43615 452 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 PALMO75781 387 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 APBB3O95704 486 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 FTCDO95954 541 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SP9P0CG40 484 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SRCP12931 536 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 GABRG2P18507 467 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 NDUFV2P19404 249 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 AMPD1P23109 780 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 IL4RP24394 825 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 CTNNA1P35221 906 aaKnown RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 ETFBP38117 255 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 HCAR3P49019 387 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SERPINH1P50454 418 aaKnown RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 DGKEP52429 567 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SULT2A1Q06520 285 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 STARD3Q14849 445 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 POLD3Q15054 466 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 PARP15Q460N3 678 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 HEATR6Q6AI08 1181 aaKnown RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 IL31Q6EBC2 164 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 C22orf39Q6P5X5 142 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 KCTD6Q8NC69 237 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SPON2Q9BUD6 331 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 ACE2Q9BYF1 805 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 MAGEH1Q9H213 219 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 SLCO3A1Q9UIG8 710 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
COL18A1-206ENST00000459895 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
COL18A1-206ENST00000459895 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 DMDP11532 3685 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 H0Y858 1186 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 DFFAO00273 331 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 SIN3BO75182 1162 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 MAP3K6O95382 1288 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 MT-CO1P00395 513 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 KDELR1P24390 212 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 FNTBP49356 437 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 COPAP53621 1224 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 SERINC3Q13530 473 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 PDK2Q15119 407 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
COL18A1-206ENST00000459895 ANKRD20A8PQ5CZ79 823 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 ARHGAP36Q6ZRI8 547 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 Q6ZVU0 165 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 NT5DC3Q86UY8 548 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 SH2D3CQ8N5H7 860 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 PQLC3Q8N755 202 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
COL18A1-206ENST00000459895 SLC39A8Q9C0K1 460 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 POLMQ9NP87 494 aaPredicted RBP13.11□□□□□ -0.31
COL18A1-206ENST00000459895 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
COL18A1-206ENST00000459895 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
COL18A1-206ENST00000459895 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 SMAD6O43541 496 aaKnown RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 KRT86O43790 486 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 ATP9BO43861 1147 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 CD160O95971 181 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 CTNNA2P26232 953 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 SERPINB6P35237 376 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 CDKN2BP42772 138 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 NDST2P52849 883 aa13.1□□□□□ -0.31
COL18A1-206ENST00000459895 YBEYP58557 167 aaPredicted RBP13.1□□□□□ -0.31
COL18A1-206ENST00000459895 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms