RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CKMT2P17540 419 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 NOS2P35228 1153 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 CDH4P55283 916 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 KRT83P78385 493 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 ARHGAP44Q17R89 818 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 EXOC3L4Q17RC7 722 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 C5orf22Q49AR2 442 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 NEK5Q6P3R8 708 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 SLC26A9Q7LBE3 791 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 ZDHHC17Q8IUH5 632 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 PIP4K2CQ8TBX8 421 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 NRSN2Q9GZP1 204 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 ACP6Q9NPH0 428 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 RWDD2AQ9UIY3 292 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 SARDHQ9UL12 918 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 OR51B4Q9Y5P0 310 aa22.12■■□□□ 1.13
CPNE1-220ENST00000458038 SYNJ2BP-COX16A0A087WUM0 186 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 PLK4O00444 970 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 KRT9P35527 623 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 CNTN1Q12860 1018 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 BNIP3Q12983 259 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 DNAJC3Q13217 504 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 AGBL4Q5VU57 503 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 OR6B2Q6IFH4 312 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 FBXL19Q6PCT2 694 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 SPATS2Q86XZ4 545 aaKnown RBP22.11■■□□□ 1.13
CPNE1-220ENST00000458038 SH2D3CQ8N5H7 860 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 C1orf131Q8NDD1 294 aaKnown RBP22.11■■□□□ 1.13
CPNE1-220ENST00000458038 ZNF397Q8NF99 534 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-220ENST00000458038 C2orf49Q9BVC5 232 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-220ENST00000458038 COX16Q9P0S2 106 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 VANGL2Q9ULK5 521 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 HS3ST2Q9Y278 367 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 PAXBP1Q9Y5B6 917 aa22.11■■□□□ 1.13
CPNE1-220ENST00000458038 SLC9A1P19634 815 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 SLC6A3Q01959 620 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 CENPCQ03188 943 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 NME3Q13232 169 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 BRMS1LQ5PSV4 323 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 OLFML1Q6UWY5 402 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 KANSL1Q7Z3B3 1105 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 MUC3BQ9H195 1237 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 SYNCQ9H7C4 482 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 HS3ST4Q9Y661 456 aa22.1■■□□□ 1.13
CPNE1-220ENST00000458038 BPTFQ12830 3046 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 M0QYT0 321 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 CBX4O00257 560 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 PAGE1O75459 146 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 DAB1O75553 588 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 GRAP2O75791 330 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 MAT2AP31153 395 aaKnown RBP22.09■■□□□ 1.13
CPNE1-220ENST00000458038 ABCG1P45844 678 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 METAP1P53582 386 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 BPIFB4P59827 614 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 E2F1Q01094 437 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 TARDBPQ13148 414 aaKnown RBP eCLIP22.09■■□□□ 1.13
CPNE1-220ENST00000458038 RTP5Q14D33 572 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 HES3Q5TGS1 186 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 GJB7Q6PEY0 223 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 FAM183BPQ6ZVS7 135 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 Q6ZVU0 165 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 SETD3Q86TU7 594 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-220ENST00000458038 TMIEQ8NEW7 156 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 KLHDC7BQ96G42 594 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 WDCPQ9H6R7 721 aa22.09■■□□□ 1.13
CPNE1-220ENST00000458038 SMG1Q96Q15 3661 aaKnown RBP22.09■■□□□ 1.13
CPNE1-220ENST00000458038 SHROOM3Q8TF72 1996 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 EIF4E1BA6NMX2 242 aaKnown RBP22.08■■□□□ 1.13
CPNE1-220ENST00000458038 F9P00740 461 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 PRKCSHP14314 528 aaPredicted RBP22.08■■□□□ 1.13
CPNE1-220ENST00000458038 ACP1P24666 158 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 PON1P27169 355 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 HS1BP3Q53T59 392 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 CREBRFQ8IUR6 639 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 FAM174AQ8TBP5 190 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 RFFLQ8WZ73 363 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 SIK2Q9H0K1 926 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 STAP1Q9ULZ2 295 aa22.08■■□□□ 1.13
CPNE1-220ENST00000458038 PTPRQQ9UMZ3 2332 aa22.08■■□□□ 1.12
CPNE1-220ENST00000458038 GCN1Q92616 2671 aaKnown RBP22.08■■□□□ 1.12
CPNE1-220ENST00000458038 TRPM6Q9BX84 2022 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 TDRD6O60522 2096 aaKnown RBP22.07■■□□□ 1.12
CPNE1-220ENST00000458038 SRCP12931 536 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 CXCR3P49682 368 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 NUMBP49757 651 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 CLCN6P51797 869 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 ZNF211Q13398 564 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-220ENST00000458038 LRRC31Q6UY01 552 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 LRRC69Q6ZNQ3 347 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 PASD1Q8IV76 773 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 OR52K2Q8NGK3 314 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 PGAP3Q96FM1 320 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-220ENST00000458038 C1orf74Q96LT6 269 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 DYRK4Q9NR20 520 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 ARHGEF38Q9NXL2 777 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 KIAA1468Q9P260 1216 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 AK5Q9Y6K8 562 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 DOCK4Q8N1I0 1966 aa22.07■■□□□ 1.12
CPNE1-220ENST00000458038 RRP8O43159 456 aaKnown RBP22.06■■□□□ 1.12
CPNE1-220ENST00000458038 PRNPP04156 253 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms