RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 Q6ZVU0 165 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 DCBLD1Q8N8Z6 715 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 FGF11Q92914 225 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 SLC2A13Q96QE2 648 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 DDIT4Q9NX09 232 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 COX16Q9P0S2 106 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 CLCA2Q9UQC9 943 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 DOCK9Q9BZ29 2069 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 MYLKQ15746 1914 aa12.74□□□□□ -0.37
TRA2B-206ENST00000456380 THAP12O43422 761 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 MED7O43513 233 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 SLC2A3P11169 496 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 CCR1P32246 355 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 CDK17Q00537 523 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 PDCLQ13371 301 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 ZNF211Q13398 564 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 AUHQ13825 339 aaKnown RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 SETMARQ53H47 684 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 DEFB106AQ8N104 65 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 WDTC1Q8N5D0 677 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 SH2D3CQ8N5H7 860 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 TMEM145Q8NBT3 493 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 NELFBQ8WX92 580 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 BAP1Q92560 729 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 KLHDC7BQ96G42 594 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 RPRD1AQ96P16 312 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 CAAP1Q9H8G2 361 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 FAM204AQ9H8W3 233 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 SLC25A13Q9UJS0 675 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 VANGL2Q9ULK5 521 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 C1QTNF3-AMACRE9PGA6 284 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 ALOX15BO15296 676 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 BNIP3LO60238 219 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 MT-CO1P00395 513 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 CTSLP07711 333 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 ZNF18P17022 549 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 DGKAP23743 735 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 GNA15P30679 374 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 GGCXP38435 758 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 MARSP56192 900 aaKnown RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 KLK6Q92876 244 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 RNF34Q969K3 372 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 PPP1R9BQ96SB3 815 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 CPXM1Q96SM3 734 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 PREBQ9HCU5 417 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 UCKL1Q9NWZ5 548 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
TRA2B-206ENST00000456380 VPS28Q9UK41 221 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 HS3ST4Q9Y661 456 aa12.73□□□□□ -0.37
TRA2B-206ENST00000456380 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
TRA2B-206ENST00000456380 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-206ENST00000456380 BECN2A8MW95 431 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 RNF103O00237 685 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 SLC31A1O15431 190 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
TRA2B-206ENST00000456380 GRAP2O75791 330 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 MT-CO3P00414 261 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 GLI1P08151 1106 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 THEGLP0DJG4 465 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 PRLRP16471 622 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 PPP1R2P41236 205 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 TLE3Q04726 772 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 ZNF177Q13360 481 aaPredicted RBP12.72□□□□□ -0.37
TRA2B-206ENST00000456380 TBC1D25Q3MII6 688 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 PIP5KL1Q5T9C9 394 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 GJB7Q6PEY0 223 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 KDM7AQ6ZMT4 941 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 ERICH1Q86X53 443 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 OR4C6Q8NH72 309 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 MYOCQ99972 504 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 TBC1D30Q9Y2I9 924 aa12.72□□□□□ -0.37
TRA2B-206ENST00000456380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRA2B-206ENST00000456380 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 GNA14O95837 355 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 SRCP12931 536 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 ACTN2P35609 894 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 STX17P56962 302 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 E2F1Q01094 437 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 NME3Q13232 169 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 ZNF284Q2VY69 593 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 C5orf22Q49AR2 442 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 EFHC1Q5JVL4 640 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 GPR155Q7Z3F1 870 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 ELOA2Q8IYF1 753 aaPredicted RBP12.71□□□□□ -0.37
TRA2B-206ENST00000456380 LSM14AQ8ND56 463 aaKnown RBP12.71□□□□□ -0.37
TRA2B-206ENST00000456380 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
TRA2B-206ENST00000456380 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.37
TRA2B-206ENST00000456380 FZD3Q9NPG1 666 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms