RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 DDX50Q9BQ39 737 aaKnown RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 GTSE1Q9NYZ3 720 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 EPS15L1Q9UBC2 864 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 F5P12259 2224 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 GOLGA6L10A0A0M3HER8 536 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 BHMG1C9JSJ3 638 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ANHXE9PGG2 379 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 H0Y626 953 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 KCNK1O00180 336 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MCF2LO15068 1137 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 KCNN4O15554 427 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SNAP91O60641 907 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CD160O95971 181 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ITGAVP06756 1048 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 TYRP14679 529 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CSKP41240 450 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MAPKAPK2P49137 400 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 FNTAP49354 379 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 NDST2P52849 883 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 DR1Q01658 176 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 GNA12Q03113 381 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 WASHC5Q12768 1159 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 LMAN2Q12907 356 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ZBTB17Q13105 803 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MTA1Q13330 715 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 XRCC4Q13426 336 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SERINC3Q13530 473 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 POLD3Q15054 466 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ANO4Q32M45 955 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SLC45A4Q5BKX6 768 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ACBD5Q5T8D3 534 aaPredicted RBP11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CHST9Q7L1S5 443 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 USP33Q8TEY7 942 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 ELSPBP1Q96BH3 223 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 CCDC114Q96M63 670 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 NECTIN4Q96NY8 510 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 PNKPQ96T60 521 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 OBP2AQ9NY56 170 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 TBC1D14Q9P2M4 693 aa11.24□□□□□ -0.61
SCN9A-205ENST00000454569 MYLKQ15746 1914 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 BCLAF3A2AJT9 711 aaKnown RBP11.23□□□□□ -0.61
SCN9A-205ENST00000454569 F5H423 210 aaPredicted RBP11.23□□□□□ -0.61
SCN9A-205ENST00000454569 SGK1O00141 431 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 ARNTLO00327 626 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 TP73O15350 636 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 RAMP2O60895 175 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 ASGR2P07307 311 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 RHOCP08134 193 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 PSMC3P17980 439 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 IVDP26440 423 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 HLA-FP30511 346 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 SERPINB6P35237 376 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
SCN9A-205ENST00000454569 IFNAR2P48551 515 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 VPS41P49754 854 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 PDK1Q15118 436 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 AAK1Q2M2I8 961 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 LEXMQ3ZCV2 418 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 TMEM215Q68D42 235 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 C8orf74Q6P047 294 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 MFN1Q8IWA4 741 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 CNTD1Q8N815 330 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 CCDC110Q8TBZ0 833 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 TFB1MQ8WVM0 346 aaKnown RBP11.23□□□□□ -0.61
SCN9A-205ENST00000454569 HDAC11Q96DB2 347 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 FEM1AQ9BSK4 669 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 SPON2Q9BUD6 331 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 TRIM31Q9BZY9 425 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 ECT2Q9H8V3 914 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 MARK1Q9P0L2 795 aa11.23□□□□□ -0.61
SCN9A-205ENST00000454569 IPO11Q9UI26 975 aaKnown RBP11.23□□□□□ -0.61
SCN9A-205ENST00000454569 ILVBLA1L0T0 632 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
SCN9A-205ENST00000454569 ECI2O75521 394 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 GJB3O75712 270 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 ZMPSTE24O75844 475 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 HEXIM1O94992 359 aaKnown RBP11.22□□□□□ -0.61
SCN9A-205ENST00000454569 METTL18O95568 372 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 IFNB1P01574 187 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 KRT14P02533 472 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 CISD3P0C7P0 127 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 PTPN3P26045 913 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 GDI1P31150 447 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 CTSOP43234 321 aaPredicted RBP11.22□□□□□ -0.61
SCN9A-205ENST00000454569 SOX9P48436 509 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 TUBB4BP68371 445 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 ARF5P84085 180 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 SLC10A7Q0GE19 358 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 IHHQ14623 411 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 ELF2Q15723 593 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 SMAD2Q15796 467 aaKnown RBP11.22□□□□□ -0.61
SCN9A-205ENST00000454569 MPP7Q5T2T1 576 aa11.22□□□□□ -0.61
SCN9A-205ENST00000454569 SYCP2LQ5T4T6 812 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms