RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ALG6Q9Y672 507 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 R4GN57 208 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 CXorf51AA0A1B0GTR3 108 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 CBX4O00257 560 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 ATP9BO43861 1147 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 MT-CO1P00395 513 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 COMTP21964 271 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 IL4RP24394 825 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 GJC1P36383 396 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 COPAP53621 1224 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 NHLH1Q02575 133 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 KRT81Q14533 505 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 IL31Q6EBC2 164 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 TXLNBQ8N3L3 684 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 SH2D3CQ8N5H7 860 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 TPCN2Q8NHX9 752 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 FRS2Q8WU20 508 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 MRGPRX1Q96LB2 322 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 MTG2Q9H4K7 406 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 LRRC19Q9H756 370 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 PLXND1Q9Y4D7 1925 aa28.63■■■□□ 2.17
SMARCC1-203ENST00000454240 MYO15AQ9UKN7 3530 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 TARSL2A2RTX5 802 aaKnown RBP28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 CD48P09326 243 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 C7P10643 843 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 NDUFV2P19404 249 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 AMPD1P23109 780 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 CNR2P34972 360 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 NBL1P41271 181 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 NDST2P52849 883 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 ARF5P84085 180 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 SLC20A2Q08357 652 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 PDK2Q15119 407 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 PARP15Q460N3 678 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 LRRC38Q5VT99 294 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 C11orf63Q6NUN7 778 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 PTPRN2Q92932 1015 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 MKRN2Q9H000 416 aaKnown RBP28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 BCCIPQ9P287 314 aaKnown RBP eCLIP28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 HYOU1Q9Y4L1 999 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 ADGRG1Q9Y653 693 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 DMDP11532 3685 aa28.62■■■□□ 2.17
SMARCC1-203ENST00000454240 VPS13AQ96RL7 3174 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 RASA4BC9J798 803 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 DCLK1O15075 740 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 ZBTB24O43167 697 aaPredicted RBP28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 RASA4O43374 803 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 BUB1O43683 1085 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 KDELR3O43731 214 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 SRCP12931 536 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 CCZ1BP86790 482 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 CCZ1P86791 482 aaPredicted RBP28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 DPYSL3Q14195 570 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 C9orf64Q5T6V5 341 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 AFMIDQ63HM1 303 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 RETSATQ6NUM9 610 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 LINGO4Q6UY18 593 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 PGBD3Q8N328 593 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 KCTD6Q8NC69 237 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 OR2T3Q8NH03 318 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 TPSD1Q9BZJ3 242 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 FBRSQ9HAH7 460 aa28.61■■■□□ 2.17
SMARCC1-203ENST00000454240 A0A0U1RQJ8 604 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 EDDM13A0A1B0GTR0 161 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 HRO43593 1189 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 SIN3BO75182 1162 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 KIF5AQ12840 1032 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 MMRN1Q13201 1228 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 GSE1Q14687 1217 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 DLG2Q15700 870 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 TMPRSS6Q8IU80 811 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 RHOT1Q8IXI2 618 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 LZTR1Q8N653 840 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 HMCESQ96FZ2 354 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 SLC39A8Q9C0K1 460 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 SLC6A17Q9H1V8 727 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 GOLPH3Q9H4A6 298 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 ETNK2Q9NVF9 386 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 KLHL11Q9NVR0 708 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 HPCAL4Q9UM19 191 aa28.6■■■□□ 2.17
SMARCC1-203ENST00000454240 SPOPO43791 374 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 CD160O95971 181 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 KDELR1P24390 212 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 CLCN6P51797 869 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 SERINC3Q13530 473 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 MAP7D3Q8IWC1 876 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 ARHGAP12Q8IWW6 846 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 NPWQ8N729 165 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 ATP11CQ8NB49 1132 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 RAPGEF5Q92565 580 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 CELF6Q96J87 481 aaKnown RBP28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 ZNF670Q9BS34 389 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 PRDM16Q9HAZ2 1276 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 USP34Q70CQ2 3546 aa28.59■■■□□ 2.17
SMARCC1-203ENST00000454240 K7ERQ8 282 aa28.58■■■□□ 2.17
SMARCC1-203ENST00000454240 SMAD6O43541 496 aaKnown RBP28.58■■■□□ 2.17
SMARCC1-203ENST00000454240 VAV1P15498 845 aa28.58■■■□□ 2.17
SMARCC1-203ENST00000454240 SERPINH1P50454 418 aaKnown RBP28.58■■■□□ 2.17
SMARCC1-203ENST00000454240 SRSF5Q13243 272 aaKnown RBP28.58■■■□□ 2.17
SMARCC1-203ENST00000454240 ACCSLQ4AC99 568 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms