RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 VPS51Q9UID3 782 aa14.95□□□□□ -0.02
NCKIPSD-207ENST00000453349 VCANP13611 3396 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CXorf51AA0A1B0GTR3 108 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 MIF4GDA9UHW6 222 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 GALR2O43603 387 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 SNAP91O60641 907 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 ADAM23O75077 832 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 ALDH1A2O94788 518 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CHRM1P11229 460 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 ZFXP17010 805 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 VASPP50552 380 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 RWDD2BP57060 319 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CSTF1Q05048 431 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 SERINC3Q13530 473 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 RFX6Q8HWS3 928 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CCDC50Q8IVM0 306 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 ATP11CQ8NB49 1132 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 EXD1Q8NHP7 514 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 PCDH19Q8TAB3 1148 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 HMCESQ96FZ2 354 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 RBM41Q96IZ5 413 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 MRGPRX3Q96LB0 322 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 NOL6Q9H6R4 1146 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 LRRC19Q9H756 370 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 SLCO3A1Q9UIG8 710 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 FBXO4Q9UKT5 387 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 CAPN6Q9Y6Q1 641 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 DOCK4Q8N1I0 1966 aa14.94□□□□□ -0.02
NCKIPSD-207ENST00000453349 ZSCAN5CA6NGD5 496 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 C3orf70A6NLC5 250 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 DFFAO00273 331 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 PAPSS2O95340 614 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 FTCDO95954 541 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 GLDCP23378 1020 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 PRKCHP24723 683 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 PAPOLAP51003 745 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 NRLP54845 237 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 COPS2P61201 443 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 PAFAH1B3Q15102 231 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 ANGPT1Q15389 498 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 TFDP3Q5H9I0 405 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 TMEM92Q6UXU6 159 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 SH2D3CQ8N5H7 860 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 TSTD1Q8NFU3 115 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 KRT35Q92764 455 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 FAF2Q96CS3 445 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 MYO19Q96H55 970 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 KLC2Q9H0B6 622 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 ETNK2Q9NVF9 386 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 POLR3BQ9NW08 1133 aaPredicted RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 RAD54BQ9Y620 910 aa14.93□□□□□ -0.02
NCKIPSD-207ENST00000453349 EDDM13A0A1B0GTR0 161 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 TARSL2A2RTX5 802 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 TTC34A8MYJ7 566 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 APOL1O14791 398 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 ATP9BO43861 1147 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 ZMPSTE24O75844 475 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 APBB3O95704 486 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 HLA-EP13747 358 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 CDKN2BP42772 138 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 PEX5P50542 639 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 CLCN6P51797 869 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 TFDP2Q14188 446 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 DLG2Q15700 870 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 AFMIDQ63HM1 303 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 NCBP2-AS2Q69YL0 99 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 SPOCD1Q6ZMY3 1216 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 METTL3Q86U44 580 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 LRRC49Q8IUZ0 686 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 REXO1L1PQ8IX06 675 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 KCNH6Q9H252 994 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 PRMT8Q9NR22 394 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 C2orf42Q9NWW7 574 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 HS3ST2Q9Y278 367 aa14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
NCKIPSD-207ENST00000453349 A0A1W2PQF6 199 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 TCRBV21S2A2A0A5A6 115 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 K7ESF4 209 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 MT-CO1P00395 513 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 SRCP12931 536 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 COL9A1P20849 921 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 MARCKSL1P49006 195 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 SERPINH1P50454 418 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 ARF5P84085 180 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 HNRNPA1L2Q32P51 320 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 ZNF528Q3MIS6 628 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 KAZNQ674X7 775 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 TSSK4Q6SA08 328 aa14.91□□□□□ -0.02
NCKIPSD-207ENST00000453349 BZW1Q7L1Q6 419 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms