RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ZNF362Q5T0B9 420 aaPredicted RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 PPP1R42Q7Z4L9 355 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 C11orf44Q8N8P7 122 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 KCNG4Q8TDN1 519 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 ABHD5Q8WTS1 349 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 SNRNP27Q8WVK2 155 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 WDR60Q8WVS4 1066 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 HMGB4Q8WW32 186 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 TFAP2BQ92481 460 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 RBM17Q96I25 401 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 PGBD1Q96JS3 809 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 SERINC2Q96SA4 455 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 DUSP26Q9BV47 211 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 TRIM5Q9C035 493 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 R3HDMLQ9H3Y0 253 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 SMYD2Q9NRG4 433 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 VPS51Q9UID3 782 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 USP22Q9UPT9 525 aa4.77□□□□□ -1.65
LINC00393-202ENST00000452852 IBTKQ9P2D0 1353 aaPredicted RBP4.77□□□□□ -1.65
LINC00393-202ENST00000452852 A0A0U1RQG5 324 aaPredicted RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 KLK10O43240 276 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 TRIAP1O43715 76 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 DOK2O60496 412 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 ZBED4O75132 1171 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 CHRM2P08172 466 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 HSPA1AP0DMV8 641 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 HSPA1BP0DMV9 641 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 EIF2S2P20042 333 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 GPTP24298 496 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 RAD52P43351 418 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PGDP52209 483 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 RIPK4P57078 832 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 EIF4A1P60842 406 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 GALNT2Q10471 571 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 WDR43Q15061 677 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PTPRRQ15256 657 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 ANKRD1Q15327 319 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 LRRC24Q50LG9 513 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 HSP90AB3PQ58FF7 597 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 FAM205BPQ63HN1 556 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 KAZNQ674X7 775 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 RGS7BPQ6MZT1 257 aaPredicted RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 FBXO42Q6P3S6 717 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 R3HCC1LQ7Z5L2 792 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PEG10Q86TG7 708 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 TTC30AQ86WT1 665 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 ADGRG3Q86Y34 549 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 B3GALNT2Q8NCR0 500 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 CPT1BQ92523 772 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 RNF125Q96EQ8 232 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 RSRC1Q96IZ7 334 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 C7orf26Q96N11 449 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 BBC3Q96PG8 261 aaPredicted RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PLEKHF1Q96S99 279 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 THUMPD2Q9BTF0 503 aaKnown RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PTDSS2Q9BVG9 487 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 TPSD1Q9BZJ3 242 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 PRKRIP1Q9H875 184 aaPredicted RBP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 NDUFAF4Q9P032 175 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 HACL1Q9UJ83 578 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 HSF4Q9ULV5 492 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 GPR34Q9UPC5 381 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00393-202ENST00000452852 CYP46A1Q9Y6A2 500 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 ABCC12Q96J65 1359 aa4.76□□□□□ -1.65
LINC00393-202ENST00000452852 DDX60Q8IY21 1712 aaKnown RBP4.75□□□□□ -1.65
LINC00393-202ENST00000452852 RIC1Q4ADV7 1423 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 VWA3AA6NCI4 1184 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 FAM90A20PA6NIJ5 464 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 EFCAB8A8MWE9 144 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 VWC2LB2RUY7 222 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 TMCC2O75069 709 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 PEPDP12955 493 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 ITGALP20701 1170 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 ABCD3P28288 659 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 UQCRC1P31930 480 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 EPHX2P34913 555 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 POLD2P49005 469 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 ITIH3Q06033 890 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00393-202ENST00000452852 SF3A3Q12874 501 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00393-202ENST00000452852 TDGQ13569 410 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 CCNG2Q16589 344 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 MEA1Q16626 185 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 CCDC184Q52MB2 194 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 PARP10Q53GL7 1025 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 ZNF484Q5JVG2 852 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 ARMC3Q5W041 872 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 PDXDC1Q6P996 788 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 RASGRP2Q7LDG7 609 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 GALNT5Q7Z7M9 940 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 SLC15A3Q8IY34 581 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 GPC2Q8N158 579 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 FAM98AQ8NCA5 519 aaKnown RBP4.75□□□□□ -1.65
LINC00393-202ENST00000452852 LINS1Q8NG48 757 aa4.75□□□□□ -1.65
LINC00393-202ENST00000452852 TBC1D22AQ8WUA7 517 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms