RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 OXSMQ9NWU1 459 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 IGSF9Q9P2J2 1179 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 SLC39A10Q9ULF5 831 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 SNX10Q9Y5X0 201 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 AP4B1Q9Y6B7 739 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 CENPFP49454 3210 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 DENRO43583 198 aaKnown RBP12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 PYGLP06737 847 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 AKAP5P24588 427 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 NMBRP28336 390 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 HOXA11P31270 313 aaPredicted RBP12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 BCAT1P54687 386 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 NAGLUP54802 743 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 ADGRE1Q14246 886 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 FLOT2Q14254 428 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 CNGA3Q16281 694 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 PABPC1LQ4VXU2 614 aaKnown RBP12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 PIGZQ86VD9 579 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 LSMEM2Q8N112 164 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 DNAAF3Q8N9W5 541 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 BHLHE22Q8NFJ8 381 aaPredicted RBP12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 C1QTNF1Q9BXJ1 281 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 SUDS3Q9H7L9 328 aaPredicted RBP12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 HSFX1Q9UBD0 423 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
THUMPD3-206ENST00000452837 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 RGSL1A5PLK6 1076 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 DCLK1O15075 740 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 TOMM70O94826 608 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 TFEBP19484 476 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 GRM5P41594 1212 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 SLC26A2P50443 739 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 ZBTB17Q13105 803 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 DPYSQ14117 519 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 ZBTB6Q15916 424 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 MYLK3Q32MK0 819 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 SLC25A52Q3SY17 297 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 APOBEC3FQ8IUX4 373 aaKnown RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 KYQ8NBH2 561 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 VPS39Q96JC1 886 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 NPAS2Q99743 824 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 NAT9Q9BTE0 207 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 MCMBPQ9BTE3 642 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 ACE2Q9BYF1 805 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 ZNF385DQ9H6B1 395 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 TASP1Q9H6P5 420 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 LRRC40Q9H9A6 602 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 C20orf96Q9NUD7 363 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 KLK14Q9P0G3 267 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 PPP1R1BQ9UD71 204 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 DNAJC25-GNG10A0A024R161 153 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 M0QYT0 321 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 RPL34P49207 117 aaKnown RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 POU5F1BQ06416 359 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 NSUN2Q08J23 767 aaKnown RBP eCLIP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 MPP3Q13368 585 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 PDK1Q15118 436 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 KLHDC10Q6PID8 442 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 KCNMB4Q86W47 210 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 KCTD4Q8WVF5 259 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 OPTNQ96CV9 577 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 ILKAPQ9H0C8 392 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 C6orf203Q9P0P8 240 aaPredicted RBP12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 CITO14578 2027 aa12.81□□□□□ -0.36
THUMPD3-206ENST00000452837 TMEM114B3SHH9 223 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 FZD9O00144 591 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 AP2A1O95782 977 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 THRAP10827 490 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ERCC2P18074 760 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ACAT1P24752 427 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 GABRB3P28472 473 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 CYLC2Q14093 348 aaPredicted RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ZNF484Q5JVG2 852 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 MARCH8Q5T0T0 291 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 NXNQ6DKJ4 435 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 PSTKQ8IV42 348 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 TTC39CQ8N584 583 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ZFP28Q8NHY6 868 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 SLC7A14Q8TBB6 771 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ZSCAN18Q8TBC5 510 aaPredicted RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 SNX27Q96L92 541 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 OMDQ99983 421 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 RBM38Q9H0Z9 239 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 PRDM16Q9HAZ2 1276 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 DDX18Q9NVP1 670 aaKnown RBP12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
THUMPD3-206ENST00000452837 GNEQ9Y223 722 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms