RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ERVW-1Q9UQF0 538 aa17.53■□□□□ 0.4
PRPF40A-204ENST00000450303 ASCC3Q8N3C0 2202 aaKnown RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 MYO1FO00160 1098 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 GIPC1O14908 333 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 KCNK5O95279 499 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 MOCS3O95396 460 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SERPINF2P08697 491 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 PDGFRAP16234 1089 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 OXTRP30559 389 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SULT1E1P49888 294 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 IRAK1P51617 712 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 AUHQ13825 339 aaKnown RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 DCAF12L1Q5VU92 463 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 PSAPL1Q6NUJ1 521 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 C14orf80Q86SX3 495 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 RNF10Q8N5U6 811 aaKnown RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 OR2I1PQ8NGU4 316 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 KIF18AQ8NI77 898 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 CEP76Q8TAP6 659 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 FOXJ1Q92949 421 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 RPL10LQ96L21 214 aaKnown RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 RPRD1AQ96P16 312 aaPredicted RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 MCEEQ96PE7 176 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 NPY6RQ99463 290 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SIK2Q9H0K1 926 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 MIR1-1HGQ9H1L0 117 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 PIGVQ9NUD9 493 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 TMEM51Q9NW97 253 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SLCO3A1Q9UIG8 710 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 TMEM59LQ9UK28 342 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 VANGL2Q9ULK5 521 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 SNX10Q9Y5X0 201 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 HS3ST4Q9Y661 456 aa17.52■□□□□ 0.4
PRPF40A-204ENST00000450303 RCCD1A6NED2 376 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 TTC34A8MYJ7 566 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 SIN3BO75182 1162 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 PAGE1O75459 146 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 MTA2O94776 668 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 ASLP04424 464 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 GPD1P21695 349 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 MZF1P28698 734 aaPredicted RBP17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 SDC4P31431 198 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 ACSL1P33121 698 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 HOXD12P35452 270 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 ARHGAP25P42331 645 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 STK19P49842 368 aaPredicted RBP17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 HADHBP55084 474 aaKnown RBP17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 PLEKHG6Q3KR16 790 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 WDR45BQ5MNZ6 344 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 RABGAP1LQ5R372 815 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 PPP1R15BQ5SWA1 713 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 FNIP1Q8TF40 1166 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 TBCBQ99426 244 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 NCAPGQ9BPX3 1015 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 LACRTQ9GZZ8 138 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 CAPN10Q9HC96 672 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 LZTFL1Q9NQ48 299 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 ANLNQ9NQW6 1124 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 TMPRSS4Q9NRS4 437 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 IP6K2Q9UHH9 426 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 ANAPC7Q9UJX3 599 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
PRPF40A-204ENST00000450303 PCDH15Q96QU1 1955 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 TMEM191CA6NGB0 347 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 METTL12A8MUP2 240 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 IGLV3-19P01714 112 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 DNTTP04053 509 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 RFC1P35251 1148 aaPredicted RBP17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 NOVA1P51513 510 aaKnown RBP17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 ECT2LQ008S8 904 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 DEUP1Q05D60 604 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 PIGHQ14442 188 aaPredicted RBP17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 ACAP1Q15027 740 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 SH3PXD2AQ5TCZ1 1133 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 JOSD2Q8TAC2 188 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 RXFP2Q8WXD0 754 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 TKTL2Q9H0I9 626 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 C6orf106Q9H6K1 298 aaPredicted RBP17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 WDCPQ9H6R7 721 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 TFR2Q9UP52 801 aa17.5■□□□□ 0.39
PRPF40A-204ENST00000450303 A0A1B0GVM2 712 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 MACROD2A1Z1Q3 448 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 TCAF2A6NFQ2 919 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 C2CD4BA6NLJ0 364 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 I6L893 689 aaPredicted RBP17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 ARHGAP33O14559 1287 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 RNF8O76064 485 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 SRPRAP08240 638 aaKnown RBP17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 PSMA2P25787 234 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 FLT3P36888 993 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 CXCR3P49682 368 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 RPL7AP62424 266 aaKnown RBP17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 HNRNPA1L2Q32P51 320 aaKnown RBP17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 C9orf64Q5T6V5 341 aa17.49■□□□□ 0.39
PRPF40A-204ENST00000450303 RNF219Q5W0B1 726 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms