RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
LSM5-208ENST00000450169 AKIP1Q9NQ31 210 aa8.78□□□□□ -1
LSM5-208ENST00000450169 SUCOQ9UBS9 1254 aaKnown RBP8.78□□□□□ -1
LSM5-208ENST00000450169 TCAF1Q9Y4C2 921 aa8.78□□□□□ -1
LSM5-208ENST00000450169 CNTNAP2Q9UHC6 1331 aa8.77□□□□□ -1
LSM5-208ENST00000450169 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 HMX2A2RU54 273 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 TRIM38O00635 465 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 AVILO75366 819 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 VAPBO95292 243 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 LDHBP07195 334 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CSH1P0DML2 217 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CSH2P0DML3 217 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 MX2P20592 715 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 GLDCP23378 1020 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 PRKCHP24723 683 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 NUMBP49757 651 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 GNG2P59768 71 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ABCE1P61221 599 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 COPZ1P61923 177 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CEP78Q5JTW2 689 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 N4BP2L1Q5TBK1 243 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 FAXCQ5TGI0 409 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 HMBOX1Q6NT76 420 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 KCNT2Q6UVM3 1135 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 MOXD1Q6UVY6 613 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 GADL1Q6ZQY3 521 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ADGRF4Q8IZF3 695 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 MFSD2AQ8NA29 543 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 GTF3C2Q8WUA4 911 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 TP53INP1Q96A56 240 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ZUFSPQ96AP4 578 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 TMA16Q96EY4 203 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 GLT1D1Q96MS3 346 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 UHRF1Q96T88 793 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CLSTN3Q9BQT9 956 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 EFHD1Q9BUP0 239 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ATP13A3Q9H7F0 1226 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 TCF7L2Q9NQB0 619 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SMYD2Q9NRG4 433 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 C20orf96Q9NUD7 363 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CXXC1Q9P0U4 656 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 TXNDC16Q9P2K2 825 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ZC3H7BQ9UGR2 993 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 IP6K2Q9UHH9 426 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ZNF229Q9UJW7 825 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 EMCNQ9ULC0 261 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CDY2AQ9Y6F7 541 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CDY1Q9Y6F8 540 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 DNMT3AQ9Y6K1 912 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 SYCE1LA8MT33 242 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 C9IYK1 514 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 TRDMT1O14717 391 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 IDH3BO43837 385 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 MTRF1O75570 445 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 STAM2O75886 525 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 KRT6AP02538 564 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 KRT6BP04259 564 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 HOXD10P28358 340 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SLC7A1P30825 629 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ETFBP38117 255 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ARL1P40616 181 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 LEPRP48357 1165 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CDK8P49336 464 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 HARS2P49590 506 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 PRKAA2P54646 552 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 P2RX3P56373 397 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 MERTKQ12866 999 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 RFTN1Q14699 578 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 CARTPTQ16568 116 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 OXLD1Q5BKU9 147 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 LRRC38Q5VT99 294 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 UBE2UQ5VVX9 321 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SUSD4Q5VX71 490 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ABRAXAS1Q6UWZ7 409 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SLC22A16Q86VW1 577 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 RALGPS2Q86X27 583 aaPredicted RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 C10orf107Q8IVU9 208 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ANKFN1Q8N957 763 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SNX31Q8N9S9 440 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 FAM71DQ8N9W8 422 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 XXYLT1Q8NBI6 393 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 BPIFB6Q8NFQ5 453 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ANGPTL6Q8NI99 470 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 S100ZQ8WXG8 99 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 SLCO4A1Q96BD0 722 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 OR52B2Q96RD2 323 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CBWD1Q9BRT8 395 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CPNE5Q9HCH3 593 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 ARMC1Q9NVT9 282 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 FKBP14Q9NWM8 211 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 CNOT6Q9ULM6 557 aaKnown RBP8.77□□□□□ -1.01
LSM5-208ENST00000450169 PCDHGA8Q9Y5G5 932 aa8.77□□□□□ -1.01
LSM5-208ENST00000450169 KAT6AQ92794 2004 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms