RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CSH2P0DML3 217 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 CD19P15391 556 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 RFC1P35251 1148 aaPredicted RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 PRAMEP78395 509 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 ENPEPQ07075 957 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 CUL2Q13617 745 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 CCDC142Q17RM4 750 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 TEX44Q53QW1 395 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 SCARA5Q6ZMJ2 495 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 SH2D5Q6ZV89 423 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 NCCRP1Q6ZVX7 275 aaPredicted RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 MRPL10Q7Z7H8 261 aaKnown RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 NUP93Q8N1F7 819 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 FAM156AQ8NDB6 213 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 ZSCAN18Q8TBC5 510 aaPredicted RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 GRIN3AQ8TCU5 1115 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.29□□□□□ -1.08
LINC00954-202ENST00000449086 ACTRT2Q8TDY3 377 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 ATXN7L3BQ96GX2 97 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 CDRT15Q96T59 188 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 SLC9A7Q96T83 725 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 EPB41L1Q9H4G0 881 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 PDZD7Q9H5P4 517 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 PSMD13Q9UNM6 376 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 SCN5AQ14524 2016 aa8.29□□□□□ -1.08
LINC00954-202ENST00000449086 C9IYK1 514 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 INPPL1O15357 1258 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 KCNN4O15554 427 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 HOXA2O43364 376 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 LDHAP00338 332 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 AMHP03971 560 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 STAG3L1P0CL83 205 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SYN1P17600 705 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PSMC3P17980 439 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 LIG4P49917 911 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CDKL1Q00532 357 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ROR1Q01973 937 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SULT2A1Q06520 285 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ANKDD1AQ495B1 522 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 N4BP2L1Q5TBK1 243 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TDRD10Q5VZ19 366 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 KBTBD6Q86V97 674 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SMYD1Q8NB12 490 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TSPAN14Q8NG11 270 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ADAM32Q8TC27 787 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TFB1MQ8WVM0 346 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF512Q96ME7 567 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PAIP1Q9H074 479 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PCDH18Q9HCL0 1135 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SELENONQ9NZV5 590 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MICAL3Q7RTP6 2002 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 E7ESA3 106 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ENPP3O14638 875 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 COX4I1P13073 169 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CD1EP15812 388 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MMP8P22894 467 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 IL1R2P27930 398 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MTTPP55157 894 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CDH15P55291 814 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 MTA1Q13330 715 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ATP1A4Q13733 1029 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 HADHQ16836 314 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CDO1Q16878 200 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 UBXN11Q5T124 520 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 OGFRL1Q5TC84 451 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TRIM72Q6ZMU5 477 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 C16orf59Q7L2K0 433 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 DEFB128Q7Z7B8 93 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 UNC5BQ8IZJ1 945 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 BHLHE22Q8NFJ8 381 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF778Q96MU6 729 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 RBM38Q9H0Z9 239 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 NRDE2Q9H7Z3 1164 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SMYD2Q9NRG4 433 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TMEM161AQ9NX61 479 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TUBGCP4Q9UGJ1 667 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TEX264Q9Y6I9 313 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 SEC24DO94855 1032 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 THRAP10827 490 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 KRT3P12035 628 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 RPL10P27635 214 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 GRM5P41594 1212 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 IDH3AP50213 366 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PIGHQ14442 188 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PPM1LQ5SGD2 360 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 TWF2Q6IBS0 349 aaKnown RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 PHF13Q86YI8 300 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CLVS1Q8IUQ0 354 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 DDI1Q8WTU0 396 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 LINC01599Q8WXQ3 324 aa8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF668Q96K58 619 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 LENG8Q96PV6 779 aaPredicted RBP8.28□□□□□ -1.08
LINC00954-202ENST00000449086 ADAM2Q99965 735 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms