RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 STAT1P42224 750 aa21.29■■□□□ 1
SDC1-205ENST00000447124 CTSKP43235 329 aa21.29■■□□□ 1
SDC1-205ENST00000447124 ADPRHP54922 357 aa21.29■■□□□ 1
SDC1-205ENST00000447124 ATP11AP98196 1134 aa21.29■■□□□ 1
SDC1-205ENST00000447124 MYL5Q02045 173 aa21.29■■□□□ 1
SDC1-205ENST00000447124 TEAD4Q15561 434 aa21.29■■□□□ 1
SDC1-205ENST00000447124 STX1AQ16623 288 aa21.29■■□□□ 1
SDC1-205ENST00000447124 CCDC14Q49A88 953 aa21.29■■□□□ 1
SDC1-205ENST00000447124 Q6ZVU0 165 aa21.29■■□□□ 1
SDC1-205ENST00000447124 FAM131BQ86XD5 332 aa21.29■■□□□ 1
SDC1-205ENST00000447124 MSANTD4Q8NCY6 345 aa21.29■■□□□ 1
SDC1-205ENST00000447124 JOSD2Q8TAC2 188 aa21.29■■□□□ 1
SDC1-205ENST00000447124 RXFP2Q8WXD0 754 aa21.29■■□□□ 1
SDC1-205ENST00000447124 MAGEB5Q9BZ81 275 aa21.29■■□□□ 1
SDC1-205ENST00000447124 MUC3BQ9H195 1237 aa21.29■■□□□ 1
SDC1-205ENST00000447124 VPS51Q9UID3 782 aa21.29■■□□□ 1
SDC1-205ENST00000447124 PCDHB9Q9Y5E1 797 aa21.29■■□□□ 1
SDC1-205ENST00000447124 PCDHGB2Q9Y5G2 931 aa21.29■■□□□ 1
SDC1-205ENST00000447124 AKAP13Q12802 2813 aa21.28■■□□□ 1
SDC1-205ENST00000447124 H0Y8X5 98 aa21.28■■□□□ 1
SDC1-205ENST00000447124 RNF103O00237 685 aa21.28■■□□□ 1
SDC1-205ENST00000447124 SMAD6O43541 496 aaKnown RBP21.28■■□□□ 1
SDC1-205ENST00000447124 SRGAP2O75044 1071 aa21.28■■□□□ 1
SDC1-205ENST00000447124 PROS1P07225 676 aa21.28■■□□□ 1
SDC1-205ENST00000447124 TPM2P07951 284 aa21.28■■□□□ 1
SDC1-205ENST00000447124 RDXP35241 583 aaKnown RBP21.28■■□□□ 1
SDC1-205ENST00000447124 CCR5P51681 352 aa21.28■■□□□ 1
SDC1-205ENST00000447124 RACK1P63244 317 aaKnown RBP21.28■■□□□ 1
SDC1-205ENST00000447124 C15orf59Q2T9L4 293 aaPredicted RBP21.28■■□□□ 1
SDC1-205ENST00000447124 PRAMEF14Q5SWL7 426 aa21.28■■□□□ 1
SDC1-205ENST00000447124 LRRC31Q6UY01 552 aa21.28■■□□□ 1
SDC1-205ENST00000447124 TFAP2DQ7Z6R9 452 aa21.28■■□□□ 1
SDC1-205ENST00000447124 SETD3Q86TU7 594 aaPredicted RBP21.28■■□□□ 1
SDC1-205ENST00000447124 SLCO6A1Q86UG4 719 aa21.28■■□□□ 1
SDC1-205ENST00000447124 OR7D4Q8NG98 312 aa21.28■■□□□ 1
SDC1-205ENST00000447124 SETD7Q8WTS6 366 aaKnown RBP21.28■■□□□ 1
SDC1-205ENST00000447124 OR8D1Q8WZ84 308 aa21.28■■□□□ 1
SDC1-205ENST00000447124 C11orf70Q9BRQ4 267 aa21.28■■□□□ 1
SDC1-205ENST00000447124 TMEM51Q9NW97 253 aa21.28■■□□□ 1
SDC1-205ENST00000447124 KLK13Q9UKR3 277 aa21.28■■□□□ 1
SDC1-205ENST00000447124 HS3ST2Q9Y278 367 aa21.28■■□□□ 1
SDC1-205ENST00000447124 PAXBP1Q9Y5B6 917 aa21.28■■□□□ 1
SDC1-205ENST00000447124 A0A1W2PR77 199 aa21.27■■□□□ 1
SDC1-205ENST00000447124 VILLO15195 856 aa21.27■■□□□ 1
SDC1-205ENST00000447124 RTN2O75298 545 aa21.27■■□□□ 1
SDC1-205ENST00000447124 GLDCP23378 1020 aa21.27■■□□□ 1
SDC1-205ENST00000447124 PPP2CBP62714 309 aa21.27■■□□□ 1
SDC1-205ENST00000447124 PPP2CAP67775 309 aa21.27■■□□□ 1
SDC1-205ENST00000447124 UBXN1Q04323 297 aa21.27■■□□□ 1
SDC1-205ENST00000447124 ZNF423Q2M1K9 1284 aa21.27■■□□□ 1
SDC1-205ENST00000447124 POM121L1PQ3SYA9 428 aa21.27■■□□□ 1
SDC1-205ENST00000447124 UNQ6494/PRO21346Q6UXR6 183 aa21.27■■□□□ 1
SDC1-205ENST00000447124 PNPLA1Q8N8W4 532 aa21.27■■□□□ 1
SDC1-205ENST00000447124 PIP4K2CQ8TBX8 421 aa21.27■■□□□ 1
SDC1-205ENST00000447124 GATA6Q92908 595 aa21.27■■□□□ 1
SDC1-205ENST00000447124 ERGIC2Q96RQ1 377 aa21.27■■□□□ 1
SDC1-205ENST00000447124 ARHGAP20Q9P2F6 1191 aa21.27■■□□□ 1
SDC1-205ENST00000447124 BTBD3Q9Y2F9 522 aa21.27■■□□□ 1
SDC1-205ENST00000447124 DAAM1Q9Y4D1 1078 aa21.27■■□□□ 1
SDC1-205ENST00000447124 IGF2RP11717 2491 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3DA0A087WVF3 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3IA0A087WXS9 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3EA0A087X179 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3KA0A087X1G2 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3FA6NER0 549 aaPredicted RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 C2CD4BA6NLJ0 364 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3LB9A6J9 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 BNIP3LO60238 219 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 CTSLP07711 333 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3HP0C7X1 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 FTH1P19P0C7X4 201 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 CDK11BP21127 795 aaKnown RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 RRM1P23921 792 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 OR1E1P30953 314 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 ADRA1BP35368 520 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 KRT83P78385 493 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 CNTN1Q12860 1018 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 CCDC183Q5T5S1 534 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3GQ6DHY5 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3CQ6IPX1 549 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 LRSAM1Q6UWE0 723 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 LINGO4Q6UY18 593 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 RAB44Q7Z6P3 723 aaPredicted RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 GLRX5Q86SX6 157 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 TBC1D3Q8IZP1 549 aaPredicted RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 ATP11CQ8NB49 1132 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 NEK11Q8NG66 645 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 OR2A12Q8NGT7 310 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 BAHD1Q8TBE0 780 aaPredicted RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 PCMTD1Q96MG8 357 aaPredicted RBP21.26■□□□□ 0.99
SDC1-205ENST00000447124 TMEM63CQ9P1W3 806 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 NEUROG3Q9Y4Z2 214 aa21.26■□□□□ 0.99
SDC1-205ENST00000447124 DOCK9Q9BZ29 2069 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 FAM221BA6H8Z2 402 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 GOLGA6L22H0YM25 854 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 ALOX15BO15296 676 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 LATO43561 262 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 ZNF821O75541 412 aaPredicted RBP21.25■□□□□ 0.99
SDC1-205ENST00000447124 ZMPSTE24O75844 475 aa21.25■□□□□ 0.99
SDC1-205ENST00000447124 TRIM16O95361 564 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms