RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 TTC13Q8NBP0 860 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 RANBP9Q96S59 729 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 PSD2Q9BQI7 771 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 SLC2A11Q9BYW1 496 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
DDX56-206ENST00000446987 PLEKHA5Q9HAU0 1116 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 SPG21Q9NZD8 308 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 EPS15L1Q9UBC2 864 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 PRG3Q9Y2Y8 225 aaPredicted RBP13.36□□□□□ -0.27
DDX56-206ENST00000446987 PDXKO00764 312 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 LRRN2O75325 713 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 SULT1C4O75897 302 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 TPPPO94811 219 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 CRTAMO95727 393 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 COMTP21964 271 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
DDX56-206ENST00000446987 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 KCNJ1P48048 391 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 GPC5P78333 572 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 KYAT1Q16773 422 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 RARS2Q5T160 578 aaKnown RBP13.36□□□□□ -0.27
DDX56-206ENST00000446987 JADE1Q6IE81 842 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 DNAAF5Q86Y56 855 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 TICAM1Q8IUC6 712 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 TTC39CQ8N584 583 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 PCYOX1LQ8NBM8 494 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 MINDY2Q8NBR6 621 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 USP33Q8TEY7 942 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 PLEKHA8Q96JA3 519 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 CCDC138Q96M89 665 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 C7orf26Q96N11 449 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.274e-12■■■■□ 21.5
DDX56-206ENST00000446987 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 PCDHB12Q9Y5F1 795 aa13.36□□□□□ -0.27
DDX56-206ENST00000446987 TNFRSF10AO00220 468 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 MCF2LO15068 1137 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 BMP10O95393 424 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 SERPINA6P08185 405 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 INHBBP09529 407 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 RBP3P10745 1247 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 MYL2P10916 166 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 ADRA1DP25100 572 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 PPM1AP35813 382 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 ADCY8P40145 1251 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 OR1G1P47890 313 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 GSSP48637 474 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 CYP2J2P51589 502 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 CLCNKBP51801 687 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 HNRNPFP52597 415 aaKnown RBP13.35□□□□□ -0.27
DDX56-206ENST00000446987 C21orf59P57076 290 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 ERVFC1P60507 584 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 SNRPFP62306 86 aaKnown RBP13.35□□□□□ -0.27
DDX56-206ENST00000446987 NFIL3Q16649 462 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 PHKG1Q16816 387 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 UPP1Q16831 310 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 FRA10AC1Q70Z53 315 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 SLC9A9Q8IVB4 645 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 BANPQ8N9N5 519 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 ACTRT2Q8TDY3 377 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 PPP4R1Q8TF05 950 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 NACC2Q96BF6 587 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 MRPL38Q96DV4 380 aaKnown RBP13.35□□□□□ -0.27
DDX56-206ENST00000446987 PRR11Q96HE9 360 aaPredicted RBP13.35□□□□□ -0.27
DDX56-206ENST00000446987 KLHL3Q9UH77 587 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 RABGEF1Q9UJ41 708 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 AP4B1Q9Y6B7 739 aa13.35□□□□□ -0.27
DDX56-206ENST00000446987 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.275e-6■■■■■ 61.3
DDX56-206ENST00000446987 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 PPEF2O14830 753 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 ALOX15BO15296 676 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 CALUO43852 315 aaPredicted RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 FAM155BO75949 473 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 ENO1P06733 434 aaKnown RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 ABCB4P21439 1286 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 NR2F2P24468 414 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 CA8P35219 290 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 STT3AP46977 705 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 ALDH7A1P49419 539 aaKnown RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 CASP4P49662 377 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 CNGA3Q16281 694 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 ZFP1Q6P2D0 407 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 C4orf33Q8N1A6 199 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 PQLC1Q8N2U9 271 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 CCDC33Q8N5R6 958 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 HASPINQ8TF76 798 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 PYDC1Q8WXC3 89 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 PRPF18Q99633 342 aaKnown RBP13.34□□□□□ -0.27
DDX56-206ENST00000446987 DHRS4Q9BTZ2 278 aa13.34□□□□□ -0.27
DDX56-206ENST00000446987 GPR62Q9BZJ7 368 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms