RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 RRN3Q9NYV6 651 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 TMEM216Q9P0N5 145 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 MTO1Q9Y2Z2 717 aaKnown RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 ITM2AO43736 263 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 SKIP12755 728 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 GLRBP48167 497 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 PAPOLAP51003 745 aaKnown RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 PIK3R6Q5UE93 754 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 RAP1GAP2Q684P5 730 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 KCNMB4Q86W47 210 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 ZSCAN18Q8TBC5 510 aaPredicted RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 UROC1Q96N76 676 aa17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
LAPTM4B-201ENST00000445593 CCL22O00626 93 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 SERPINB9P50453 376 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 AIF1P55008 147 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 DUSP4Q13115 394 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 ZNF460Q14592 562 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 ALFQ53S48 1182 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 STEAP4Q687X5 459 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 TAS1R1Q7RTX1 841 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 NUP93Q8N1F7 819 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 RILPQ96NA2 401 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 BRD8Q9H0E9 1235 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC39A10Q9ULF5 831 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.333e-6■■■■■ 137.9
LAPTM4B-201ENST00000445593 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 PHGDHO43175 533 aaKnown RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 GJB3O75712 270 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 HLA-DQB2P05538 268 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 DSC1Q08554 894 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 CTBP1Q13363 440 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 RAPH1Q70E73 1250 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 MARK2Q7KZI7 788 aaKnown RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 PPP1R36Q96LQ0 422 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 NOD2Q9HC29 1040 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 SNX15Q9NRS6 342 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 NEU3Q9UQ49 428 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 PCDHB7Q9Y5E2 793 aa17.13■□□□□ 0.33
LAPTM4B-201ENST00000445593 NCAM2O15394 837 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ATP6V1G2O95670 118 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CALRP27797 417 aaKnown RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 AQP5P55064 265 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TAF10Q12962 218 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TCTN1Q2MV58 587 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 LHX8Q68G74 356 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 FSTL4Q6MZW2 842 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CLNKQ7Z7G1 428 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 C10orf107Q8IVU9 208 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 MTBPQ96DY7 904 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 SMOC2Q9H3U7 446 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 NT5MQ9NPB1 228 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 PPARGC1AQ9UBK2 798 aaKnown RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ADAM28Q9UKQ2 775 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ZCWPW2A0A1B0GU75 182 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 J3KR12 359 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 VAPBO95292 243 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 T-ENOLP0DO92 83 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TYMPP19971 482 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 GP5P40197 560 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TBX4P57082 545 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 EML3Q32P44 896 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CHSY1Q86X52 802 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 DENND6AQ8IWF6 608 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 EBF4Q9BQW3 602 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ARL8BQ9NVJ2 186 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 EMCNQ9ULC0 261 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 KIF3CO14782 793 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 GSTA2P09210 222 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 HCAR3P49019 387 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CCNHP51946 323 aaPredicted RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 ALDH18A1P54886 795 aaKnown RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CFAP52Q8N1V2 620 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 SHCBP1LQ9BZQ2 653 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 CCSER2Q9H7U1 834 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 IPO11Q9UI26 975 aaKnown RBP17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 PCDHB5Q9Y5E4 795 aa17.12■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC12A8A0AV02 714 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 MAFKO60675 156 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 HAUS5O94927 633 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 BPGMP07738 259 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 HOXD10P28358 340 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 CRHR1P34998 444 aa17.11■□□□□ 0.33
LAPTM4B-201ENST00000445593 SLC11A1P49279 550 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms