RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 MIB1Q86YT6 1006 aa19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF689Q96CS4 500 aaPredicted RBP19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 KLF6Q99612 283 aaPredicted RBP19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 HERC2P3Q9BVR0 1158 aa19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 RETREG1Q9H6L5 497 aa19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 NDFIP2Q9NV92 336 aa19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 IPO11Q9UI26 975 aaKnown RBP19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 RPS6KL1Q9Y6S9 549 aa19.25■□□□□ 0.67
SEMA3D-202ENST00000444867 COPEO14579 308 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 UGT1A9O60656 530 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 EFCAB14O75071 495 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 RFPL1O75677 317 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 DHRS4L1P0CG22 281 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 ARMC3Q5W041 872 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 KLHDC10Q6PID8 442 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 SPATA21Q7Z572 469 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 CHSY1Q86X52 802 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 CCDC117Q8IWD4 279 aaPredicted RBP19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 SLC39A11Q8N1S5 342 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 USP33Q8TEY7 942 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 VWCEQ96DN2 955 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 CERS2Q96G23 380 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF333Q96JL9 665 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 PITPNM3Q9BZ71 974 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 NOL6Q9H6R4 1146 aaKnown RBP19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 UGT1A7Q9HAW7 530 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 UGT1A10Q9HAW8 530 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 UGT1A8Q9HAW9 530 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 PIH1D1Q9NWS0 290 aaKnown RBP19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 GRID1Q9ULK0 1009 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 STARD13Q9Y3M8 1113 aa19.24■□□□□ 0.67
SEMA3D-202ENST00000444867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 USP12O75317 370 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 ABLIM3O94929 683 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 ADRA1DP25100 572 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 ATP5C1P36542 298 aaKnown RBP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 DSG1Q02413 1049 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 HNRNPDQ14103 355 aaKnown RBP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 SPOUT1Q5T280 376 aaKnown RBP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 FBXL22Q6P050 247 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 PACS1Q6VY07 963 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 OTOP3Q7RTS5 596 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 ACMSDQ8TDX5 336 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 CLSTN3Q9BQT9 956 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 RBM22Q9NW64 420 aaKnown RBP eCLIP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 DNMT3LQ9UJW3 386 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 SOX13Q9UN79 622 aa19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 MAGED2Q9UNF1 606 aaPredicted RBP19.23■□□□□ 0.67
SEMA3D-202ENST00000444867 NEBLO76041 1014 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 LAG3P18627 525 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ETV4P43268 484 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 MAPKAPK2P49137 400 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 RENBPP51606 427 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ZKSCAN8Q15776 578 aaPredicted RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 RAP1GAP2Q684P5 730 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 RASSF3Q86WH2 238 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 CMTR2Q8IYT2 770 aaKnown RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 DIS3LQ8TF46 1054 aaKnown RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF669Q96BR6 464 aaPredicted RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 TMEM169Q96HH4 297 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 CPNE1Q99829 537 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 TBL1YQ9BQ87 522 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 KDM4CQ9H3R0 1056 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 RC3H2Q9HBD1 1191 aaKnown RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ZFATQ9P243 1243 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 SLC17A7Q9P2U7 560 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 CCT8L1PA6NM43 557 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 MYO1CO00159 1063 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 HLA-DQB2P05538 268 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 YBEYP58557 167 aaPredicted RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 TNK2Q07912 1038 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 OLIG2Q13516 323 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 PARP15Q460N3 678 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 C5orf22Q49AR2 442 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ANKRD20A4Q4UJ75 823 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 RNF187Q5TA31 235 aaPredicted RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ZNF75CPQ92670 426 aaPredicted RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 MYRFLQ96LU7 910 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 SRPK1Q96SB4 655 aaKnown RBP19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ENTPD7Q9NQZ7 604 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 TXNDC16Q9P2K2 825 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 ARL2BPQ9Y2Y0 163 aa19.22■□□□□ 0.67
SEMA3D-202ENST00000444867 HMX2A2RU54 273 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 EDF1O60869 148 aaKnown RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 CNTN5O94779 1100 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 HMBSP08397 361 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 RPL17P18621 184 aaKnown RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 TACR2P21452 398 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 GP5P40197 560 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 MPP3Q13368 585 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 BMPR2Q13873 1038 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 LACTB2Q53H82 288 aaPredicted RBP19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 ALFQ53S48 1182 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 CERCAMQ5T4B2 595 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 GRTP1Q5TC63 336 aa19.21■□□□□ 0.67
SEMA3D-202ENST00000444867 TFAP2DQ7Z6R9 452 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms