RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 LRP3O75074 770 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 ADH1BP00325 375 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 RETP07949 1114 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 NDUFV2P19404 249 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 P2RY2P41231 377 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 NOP2P46087 812 aaKnown RBP12.54□□□□□ -0.4
LTBR-204ENST00000444814 PDK2Q15119 407 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 CCDC112Q8NEF3 446 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 SLC35G2Q8TBE7 412 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 GANCQ8TET4 914 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 ARHGEF26Q96DR7 871 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 ZC3H10Q96K80 434 aaKnown RBP12.54□□□□□ -0.4
LTBR-204ENST00000444814 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 TMPRSS4Q9NRS4 437 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 DNAI1Q9UI46 699 aa12.54□□□□□ -0.4
LTBR-204ENST00000444814 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
LTBR-204ENST00000444814 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 HMGB1P1B2RPK0 211 aaPredicted RBP12.53□□□□□ -0.4
LTBR-204ENST00000444814 WASH3PC4AMC7 463 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 I6L893 689 aaPredicted RBP12.53□□□□□ -0.4
LTBR-204ENST00000444814 HRO43593 1189 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 MTA2O94776 668 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 NDUFA10O95299 355 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 LCA5LO95447 670 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 RAD51Q06609 339 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 DMWDQ09019 674 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 TCEAL1Q15170 157 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
LTBR-204ENST00000444814 KIAA1211LQ6NV74 962 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 UMODL1-AS1Q8N2C9 162 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 PCDH20Q8N6Y1 951 aaKnown RBP12.53□□□□□ -0.4
LTBR-204ENST00000444814 KCTD6Q8NC69 237 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 HSPH1Q92598 858 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 PPP1R16AQ96I34 528 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 RPL10LQ96L21 214 aaKnown RBP12.53□□□□□ -0.4
LTBR-204ENST00000444814 PRSS16Q9NQE7 514 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
LTBR-204ENST00000444814 VPS51Q9UID3 782 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
LTBR-204ENST00000444814 PCDHA13Q9Y5I0 950 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
LTBR-204ENST00000444814 A0A0A6YYK5 440 aaPredicted RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 PRNPP04156 253 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 HLA-EP13747 358 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 C5AR1P21730 350 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 CD6P30203 668 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 MRE11P49959 708 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 SERPINH1P50454 418 aaKnown RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 IRAK1P51617 712 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 ZNF252P-AS1Q0IIN9 211 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 SEMA3BQ13214 749 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 MESDQ14696 234 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 DLG2Q15700 870 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 TMCO3Q6UWJ1 677 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 USP30Q70CQ3 517 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 PYROXD2Q8N2H3 581 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 BBS5Q8N3I7 341 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 SPC24Q8NBT2 197 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 ISG20Q96AZ6 181 aaKnown RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 ALG14Q96F25 216 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 OMDQ99983 421 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 ITM2CQ9NQX7 267 aa12.52□□□□□ -0.4
LTBR-204ENST00000444814 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.4
LTBR-204ENST00000444814 TMEM110-MUSTN1A8MSY1 372 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 TTC34A8MYJ7 566 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 FAM72CH0Y354 149 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 KDELR3O43731 214 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 SPOPO43791 374 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 SIN3BO75182 1162 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 RARAP10276 462 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 FECHP22830 423 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 HOXD12P35452 270 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 CTSOP43234 321 aaPredicted RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 CDH6P55285 790 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 SNRPD1P62314 119 aaKnown RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 RPL6Q02878 288 aaKnown RBP12.52□□□□□ -0.41
LTBR-204ENST00000444814 PLK5Q496M5 336 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 RAB6CQ53S08 254 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 WDR45BQ5MNZ6 344 aa12.52□□□□□ -0.41
LTBR-204ENST00000444814 FAM72AQ5TYM5 149 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms