RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LAG3P18627 525 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 ATP5C1P36542 298 aaKnown RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 MAPKAPK2P49137 400 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 PAPOLAP51003 745 aaKnown RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 RENBPP51606 427 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 CRADDP78560 199 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 HNRNPDQ14103 355 aaKnown RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 KLHDC10Q6PID8 442 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 SH2D5Q6ZV89 423 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 SPATA21Q7Z572 469 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 TMEM135Q86UB9 458 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 RASSF3Q86WH2 238 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 CHSY1Q86X52 802 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 CNTD1Q8N815 330 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 GIPC2Q8TF65 315 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 STARD13Q9Y3M8 1113 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 FOXN2P32314 431 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 YBEYP58557 167 aaPredicted RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 DSG1Q02413 1049 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 ARHGAP36Q6ZRI8 547 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 TRIM42Q8IWZ5 723 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 CMTR2Q8IYT2 770 aaKnown RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 USP33Q8TEY7 942 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 ZNF689Q96CS4 500 aaPredicted RBP15.99■□□□□ 0.15
SNX13-204ENST00000444712 ZNF333Q96JL9 665 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 CPNE1Q99829 537 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 TBL1YQ9BQ87 522 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 KDM4CQ9H3R0 1056 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 ENTPD7Q9NQZ7 604 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 NSMCE4AQ9NXX6 385 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 STK39Q9UEW8 545 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 SOX13Q9UN79 622 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 ARL2BPQ9Y2Y0 163 aa15.99■□□□□ 0.15
SNX13-204ENST00000444712 PPP3CCP48454 512 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 MPP3Q13368 585 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 ZKSCAN8Q15776 578 aaPredicted RBP15.98■□□□□ 0.15
SNX13-204ENST00000444712 PARP15Q460N3 678 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 PACS1Q6VY07 963 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 SLC39A11Q8N1S5 342 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 PTCD2Q8WV60 388 aaKnown RBP15.98■□□□□ 0.15
SNX13-204ENST00000444712 ZNF669Q96BR6 464 aaPredicted RBP15.98■□□□□ 0.15
SNX13-204ENST00000444712 KLF6Q99612 283 aaPredicted RBP15.98■□□□□ 0.15
SNX13-204ENST00000444712 ACTR5Q9H9F9 607 aaPredicted RBP15.98■□□□□ 0.15
SNX13-204ENST00000444712 SP110Q9HB58 689 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 NDFIP2Q9NV92 336 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 HAUS2Q9NVX0 235 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 RBM22Q9NW64 420 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNX13-204ENST00000444712 MAFFQ9ULX9 164 aa15.98■□□□□ 0.15
SNX13-204ENST00000444712 F5H5T6 163 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ABLIM3O94929 683 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 TBX18O95935 607 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 DHRS4L1P0CG22 281 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ADRA1DP25100 572 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 GP5P40197 560 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ALDH1A3P47895 512 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 VEPH1Q14D04 833 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 GRTP1Q5TC63 336 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 RAP1GAP2Q684P5 730 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 FBXL22Q6P050 247 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 PLD4Q96BZ4 506 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ZNF512Q96ME7 567 aaPredicted RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 RPRD1AQ96P16 312 aaPredicted RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 TRIM56Q9BRZ2 755 aaKnown RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 NACA2Q9H009 215 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 CCSER2Q9H7U1 834 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 CCT8L1PA6NM43 557 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 MYO1CO00159 1063 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 USP12O75317 370 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 RFPL1O75677 317 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 URODP06132 367 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 SLC11A2P49281 568 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 HARS2P49590 506 aaKnown RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 TAF12Q16514 161 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ANKRD20A4Q4UJ75 823 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 HECTD3Q5T447 861 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 STXBP5Q5T5C0 1151 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 OTOP3Q7RTS5 596 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 GPR65Q8IYL9 337 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ZNF75CPQ92670 426 aaPredicted RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 ATP2A3Q93084 1043 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 AZIN2Q96A70 460 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 TRMT2BQ96GJ1 504 aaKnown RBP15.97■□□□□ 0.15
SNX13-204ENST00000444712 CLSTN3Q9BQT9 956 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 SLC25A51Q9H1U9 297 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 C11orf49Q9H6J7 331 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 SPG21Q9NZD8 308 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 TRPM5Q9NZQ8 1165 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 KLHL14Q9P2G3 628 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 PHTF1Q9UMS5 762 aa15.97■□□□□ 0.15
SNX13-204ENST00000444712 ADAM12O43184 909 aa15.96■□□□□ 0.15
SNX13-204ENST00000444712 UGT1A9O60656 530 aa15.96■□□□□ 0.15
SNX13-204ENST00000444712 EDF1O60869 148 aaKnown RBP15.96■□□□□ 0.15
SNX13-204ENST00000444712 RAMP2O60895 175 aa15.96■□□□□ 0.15
SNX13-204ENST00000444712 HLA-DQB2P05538 268 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms