RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 SEMA3BQ13214 749 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 RSPO4Q2I0M5 234 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 LYSMD4Q5XG99 296 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 SARM1Q6SZW1 724 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 LEKR1Q6ZMV7 388 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 Q6ZVU0 165 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 SH2D3CQ8N5H7 860 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 GPR161Q8N6U8 529 aaKnown RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 ZNF419Q96HQ0 510 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 HSPA12BQ96MM6 686 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 KCTD15Q96SI1 283 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 SNRNP25Q9BV90 132 aaKnown RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 C6orf106Q9H6K1 298 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
GARNL3-208ENST00000444677 ATP13A1Q9HD20 1204 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 FSCN3Q9NQT6 498 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 VPS45Q9NRW7 570 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 ABHD10Q9NUJ1 306 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 TMEM248Q9NWD8 314 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 SCINQ9Y6U3 715 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 NUP205Q92621 2012 aa13.86□□□□□ -0.19
GARNL3-208ENST00000444677 THADAQ6YHU6 1953 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 A0A1W2PP55 124 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 CBX4O00257 560 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 CD160O95971 181 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 IGLV3-19P01714 112 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 IL1R2P27930 398 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 EPHB2P29323 1055 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 SLC8A1P32418 973 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 NNMTP40261 264 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 PSMD8P48556 350 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 IRX4P78413 519 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 ARF5P84085 180 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 TRIM14Q14142 442 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 CST6Q15828 149 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 POM121L1PQ3SYA9 428 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 TXNRD3NBQ6F5E7 133 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 DCAF4L2Q8NA75 395 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 ATP11CQ8NB49 1132 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 NETO2Q8NC67 525 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 GANCQ8TET4 914 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 FNIP1Q8TF40 1166 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 C2orf49Q9BVC5 232 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 NUP85Q9BW27 656 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 ACE2Q9BYF1 805 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 KLC2Q9H0B6 622 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 NEUROG2Q9H2A3 272 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 TNKS2Q9H2K2 1166 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 PABPC3Q9H361 631 aaKnown RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 DHX35Q9H5Z1 703 aaKnown RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 FBRSQ9HAH7 460 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 MRPL47Q9HD33 250 aaKnown RBP13.85□□□□□ -0.19
GARNL3-208ENST00000444677 PILRBQ9UKJ0 227 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 AP4E1Q9UPM8 1137 aa13.85□□□□□ -0.19
GARNL3-208ENST00000444677 CEP192Q8TEP8 1941 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 ZNF821O75541 412 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 OXTRP30559 389 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 MAPKAPK2P49137 400 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 ZNF75DP51815 510 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 LMNB2Q03252 620 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 ZBTB16Q05516 673 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 AASDHQ4L235 1098 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 ERMARDQ5T6L9 678 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 DCAF12L1Q5VU92 463 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 IL31Q6EBC2 164 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 SYT12Q8IV01 421 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 RGL4Q8IZJ4 473 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 AADATQ8N5Z0 425 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 C12orf50Q8NA57 414 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 CHST14Q8NCH0 376 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 SPTLC3Q9NUV7 552 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 FBXL12Q9NXK8 326 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 HS3ST2Q9Y278 367 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 FCF1Q9Y324 198 aaKnown RBP13.84□□□□□ -0.19
GARNL3-208ENST00000444677 SLCO1B1Q9Y6L6 691 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
GARNL3-208ENST00000444677 SDK1Q7Z5N4 2213 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 MYO18AQ92614 2054 aaKnown RBP13.83□□□□□ -0.2
GARNL3-208ENST00000444677 METTL12A8MUP2 240 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 AKR1B15C9JRZ8 316 aaPredicted RBP13.83□□□□□ -0.2
GARNL3-208ENST00000444677 PRPSAP2O60256 369 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
GARNL3-208ENST00000444677 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
GARNL3-208ENST00000444677 RNF8O76064 485 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 IL1BP01584 269 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 CTSLP07711 333 aa13.83□□□□□ -0.2
GARNL3-208ENST00000444677 PUM1Q14671 1186 aaKnown RBP eCLIP13.83□□□□□ -0.2
GARNL3-208ENST00000444677 SLC18A3Q16572 532 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms