RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ADRA1BP35368 520 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 PTPN9P43378 593 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 PTP4A2Q12974 167 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 RWDD4Q6NW29 188 aaKnown RBP20.58■□□□□ 0.89
LRCH3-208ENST00000443727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.58■□□□□ 0.89
LRCH3-208ENST00000443727 STRADAQ7RTN6 431 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 DRC7Q8IY82 874 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 DCAF4L2Q8NA75 395 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 C3orf20Q8ND61 904 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 FAM172AQ8WUF8 416 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 OR12D3Q9UGF7 316 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 VPS51Q9UID3 782 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 HS3ST2Q9Y278 367 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 SLCO1B1Q9Y6L6 691 aa20.58■□□□□ 0.89
LRCH3-208ENST00000443727 CACNA1EQ15878 2313 aa20.58■□□□□ 0.88
LRCH3-208ENST00000443727 ILVBLA1L0T0 632 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 C1QTNF3-AMACRE9PGA6 284 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 CBX4O00257 560 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 ALOX15BO15296 676 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 MT-CO1P00395 513 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 IGHV4-34P06331 123 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 SRCP12931 536 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 CD59P13987 128 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 TNFAIP3P21580 790 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 GPD1P21695 349 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 SIM1P81133 766 aaPredicted RBP20.57■□□□□ 0.88
LRCH3-208ENST00000443727 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
LRCH3-208ENST00000443727 FOXC1Q12948 553 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 HLA-BQ31612 363 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 POM121L1PQ3SYA9 428 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 RAB6CQ53S08 254 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 LINGO4Q6UY18 593 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 ZNF783Q6ZMS7 281 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 OR7D4Q8NG98 312 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 PSMB7Q99436 277 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 RAB6CQ9H0N0 254 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 OSGEPQ9NPF4 335 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 MYO6Q9UM54 1294 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 PCDHB9Q9Y5E1 797 aa20.57■□□□□ 0.88
LRCH3-208ENST00000443727 TPRP12270 2363 aaKnown RBP20.57■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3DA0A087WVF3 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3IA0A087WXS9 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3EA0A087X179 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3KA0A087X1G2 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 SPAARA0A1B0GVQ0 90 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3FA6NER0 549 aaPredicted RBP20.56■□□□□ 0.88
LRCH3-208ENST00000443727 SIGLEC16A6NMB1 481 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3LB9A6J9 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 MCF2LO15068 1137 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 SH3BP5O60239 455 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 GJB3O75712 270 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 SERPINC1P01008 464 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3HP0C7X1 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 DESP17661 470 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 RRM1P23921 792 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 GRIA4P48058 902 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 ADPRHP54922 357 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 GSCP56915 257 aaPredicted RBP20.56■□□□□ 0.88
LRCH3-208ENST00000443727 C21orf59P57076 290 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TPM4P67936 248 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 HNRNPDQ14103 355 aaKnown RBP20.56■□□□□ 0.88
LRCH3-208ENST00000443727 KIF19Q2TAC6 998 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3GQ6DHY5 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3CQ6IPX1 549 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 RETSATQ6NUM9 610 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 WDR59Q6PJI9 974 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 MON1BQ7L1V2 547 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 TBC1D3Q8IZP1 549 aaPredicted RBP20.56■□□□□ 0.88
LRCH3-208ENST00000443727 SKA1Q96BD8 255 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 IL21RQ9HBE5 538 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 ATP13A1Q9HD20 1204 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 PPARGC1AQ9UBK2 798 aaKnown RBP20.56■□□□□ 0.88
LRCH3-208ENST00000443727 PPM1HQ9ULR3 514 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 ANKRD6Q9Y2G4 727 aa20.56■□□□□ 0.88
LRCH3-208ENST00000443727 ACACBO00763 2458 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 A0A1W2PPC4 97 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 K7ERQ8 282 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 PLK4O00444 970 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 RECQLP46063 649 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 CCR5P51681 352 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 CLCN6P51797 869 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 HDAC4P56524 1084 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 RACK1P63244 317 aaKnown RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 BNC1Q01954 994 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 GNA12Q03113 381 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 ASIC2Q16515 512 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 ACAD10Q6JQN1 1059 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 SCYL2Q6P3W7 929 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 DCUN1D2Q6PH85 259 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 LAYNQ6UX15 382 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 NAXDQ8IW45 347 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 PIP4K2CQ8TBX8 421 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 SETD7Q8WTS6 366 aaKnown RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 CENPIQ92674 756 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 MCEEQ96PE7 176 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 ACE2Q9BYF1 805 aaPredicted RBP20.55■□□□□ 0.88
LRCH3-208ENST00000443727 OSBPL2Q9H1P3 480 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 AASDHPPTQ9NRN7 309 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 TM7SF3Q9NS93 570 aa20.55■□□□□ 0.88
LRCH3-208ENST00000443727 SARDHQ9UL12 918 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms