RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SCML1Q9UN30 329 aa9.01□□□□□ -0.97
USP6NL-203ENST00000443016 TTC34A8MYJ7 566 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 PAGE1O75459 146 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 RNASEH2AO75792 299 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 GFPT2O94808 682 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 LSM8O95777 96 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 F9P00740 461 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 IL1BP01584 269 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 DEKP35659 375 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 SOX5P35711 763 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 AFF3P51826 1226 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 ADKP55263 362 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 FOXC1Q12948 553 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 GRIK2Q13002 908 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 EIF4EBP2Q13542 120 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 VPS36Q86VN1 386 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 TC2NQ8N9U0 490 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 KDM1BQ8NB78 822 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 BAP1Q92560 729 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 MYO19Q96H55 970 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 LMLNQ96KR4 655 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 DNAJC7Q99615 494 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 PRMT1Q99873 361 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 ZDHHC5Q9C0B5 715 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 MUC3BQ9H195 1237 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 OSBPL2Q9H1P3 480 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 PCED1AQ9H1Q7 454 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 RSPH9Q9H1X1 276 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 PIGVQ9NUD9 493 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 VPS28Q9UK41 221 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 ZBTB32Q9Y2Y4 487 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 HS3ST4Q9Y661 456 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 CEP192Q8TEP8 1941 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 CKAP5Q14008 2032 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 PCNX2A6NKB5 2137 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 CFAP47Q6ZTR5 3102 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 CABIN1Q9Y6J0 2220 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 EDDM13A0A1B0GTR0 161 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 TARSL2A2RTX5 802 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 CLDN11O75508 207 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 MMEP08473 750 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 MZF1P28698 734 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 STK19P49842 368 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 JAM2P57087 298 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 SIM1P81133 766 aaPredicted RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 ARID5BQ14865 1188 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 CST6Q15828 149 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 SLC25A52Q3SY17 297 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 BRMS1LQ5PSV4 323 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 NAA35Q5VZE5 725 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 DPY19L2P1Q6NXN4 242 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 LRRC31Q6UY01 552 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 ADAT2Q7Z6V5 191 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 TSC1Q92574 1164 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 IGSF8Q969P0 613 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 MRGPRX3Q96LB0 322 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 SGK2Q9HBY8 427 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 SLC25A13Q9UJS0 675 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 BZW2Q9Y6E2 419 aaKnown RBP9□□□□□ -0.97
USP6NL-203ENST00000443016 FREM2Q5SZK8 3169 aa9□□□□□ -0.97
USP6NL-203ENST00000443016 A0A1W2PP55 124 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 MID1O15344 667 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 BNIP3LO60238 219 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 PMLP29590 882 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 SLC8A1P32418 973 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 CDH5P33151 784 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 GABRB2P47870 512 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 PSMD8P48556 350 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 CSNK1EP49674 416 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 SEMA3BQ13214 749 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 ELOAQ14241 798 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 ELAVL3Q14576 367 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 C9orf64Q5T6V5 341 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 IL27RAQ6UWB1 636 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 ZNF677Q86XU0 584 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 XYLT1Q86Y38 959 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 BIRC7Q96CA5 298 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 TBCBQ99426 244 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 NPY6RQ99463 290 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 BAG1Q99933 345 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 PABPC3Q9H361 631 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 DEF6Q9H4E7 631 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 USP24Q9UPU5 2620 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 LRRC72A6NJI9 287 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 SRGAP2O75044 1071 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 IPO7O95373 1038 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 CER1O95813 267 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 SERPING1P05155 500 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 TFE3P19532 575 aaPredicted RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 HNRNPH3P31942 346 aaKnown RBP8.99□□□□□ -0.97
USP6NL-203ENST00000443016 FLT3P36888 993 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 CXCR3P49682 368 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 KLHL30Q0D2K2 578 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 SLC14A1Q13336 389 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 TEAD4Q15561 434 aa8.99□□□□□ -0.97
USP6NL-203ENST00000443016 CXorf57Q6NSI4 855 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms