RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 PCK1P35558 622 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 STK19P49842 368 aaPredicted RBP12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 LIMK1P53667 647 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 OGDHQ02218 1023 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 ZNF33AQ06730 810 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 SEMA3BQ13214 749 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 DLG2Q15700 870 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 CST6Q15828 149 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 SLC18A3Q16572 532 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 WDR45BQ5MNZ6 344 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 CCDC122Q5T0U0 273 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 RWDD4Q6NW29 188 aaKnown RBP12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 TMEFF1Q8IYR6 380 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 FRMD1Q8N878 549 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 NIPA2Q8N8Q9 360 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 NETO1Q8TDF5 533 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 TOE1Q96GM8 510 aaKnown RBP12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 PSMB7Q99436 277 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 CEP44Q9C0F1 390 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 SUSD2Q9UGT4 822 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 VPS51Q9UID3 782 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 NEU3Q9UQ49 428 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
CDCA4P3-201ENST00000442572 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FRYLO94915 3013 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ADAMTS9Q9P2N4 1935 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 TP53BP1Q12888 1972 aaPredicted RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 A0A0D9SEW6 157 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM72CH0Y354 149 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 PRPSAP2O60256 369 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 RAMP2O60895 175 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 MFAP3LO75121 409 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 CYP1A2P05177 515 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 SRCP12931 536 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 EPHB2P29323 1055 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 PTGER3P43115 390 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ZNF252P-AS1Q0IIN9 211 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM72AQ5TYM5 149 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM72DQ6L9T8 149 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM72BQ86X60 149 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 RTL3Q8N8U3 475 aaKnown RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 DNASE2BQ8WZ79 361 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 OR8D1Q8WZ84 308 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ARHGEF2Q92974 986 aaKnown RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ISG20Q96AZ6 181 aaKnown RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 FAM129BQ96TA1 746 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ACE2Q9BYF1 805 aaPredicted RBP12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 BTBD1Q9H0C5 482 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 DEF6Q9H4E7 631 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 MYO1AQ9UBC5 1043 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 IP6K2Q9UHH9 426 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 PILRBQ9UKJ0 227 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 CEP250Q9BV73 2442 aa12.84□□□□□ -0.35
CDCA4P3-201ENST00000442572 METTL12A8MUP2 240 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 AKR1B15C9JRZ8 316 aaPredicted RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 MCF2LO15068 1137 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 LRCH4O75427 683 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 GNSP15586 552 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 MIPP30301 263 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 SLC8A1P32418 973 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 HCAR3P49019 387 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 GALCP54803 685 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 CCDC15Q0P6D6 951 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 PUM1Q14671 1186 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 POLD3Q15054 466 aaPredicted RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 DUOXA1Q1HG43 343 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 ASTE1Q2TB18 679 aaPredicted RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 AASDHQ4L235 1098 aaPredicted RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 BOLA3Q53S33 107 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 IL31Q6EBC2 164 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 SLC41A1Q8IVJ1 513 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 UMODL1-AS1Q8N2C9 162 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 STK40Q8N2I9 435 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 PCDH20Q8N6Y1 951 aaKnown RBP12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 ATP11CQ8NB49 1132 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 OR7D4Q8NG98 312 aa12.83□□□□□ -0.36
CDCA4P3-201ENST00000442572 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms