RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PTPRN2Q92932 1015 aa15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 SIPA1Q96FS4 1042 aa15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 BAG1Q99933 345 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 RSPH9Q9H1X1 276 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 ITM2CQ9NQX7 267 aa15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 USP36Q9P275 1121 aaKnown RBP15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 RCOR3Q9P2K3 495 aaPredicted RBP15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 HPCAL4Q9UM19 191 aa15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 PCDHA13Q9Y5I0 950 aa15.39■□□□□ 0.05
CSNK1E-210ENST00000442216 A0A0A6YYK5 440 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 ZSCAN5CA6NGD5 496 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SOWAHDA6NJG2 315 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 H3BRJ5 948 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SNAP91O60641 907 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 RNASEH1O60930 286 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SIN3BO75182 1162 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 RHOBTB1O94844 696 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 IGLV3-19P01714 112 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 ACADMP11310 421 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SRCP12931 536 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 TCF4P15884 667 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 OXTRP30559 389 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 ARL4AP40617 200 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 NDST2P52849 883 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 GSDMDP57764 484 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SFSWAPQ12872 951 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 DLG2Q15700 870 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 PARP15Q460N3 678 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 PLK5Q496M5 336 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 PPP6R3Q5H9R7 873 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 DAB2IPQ5VWQ8 1189 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 ZNF776Q68DI1 518 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 IL31Q6EBC2 164 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SLC36A4Q6YBV0 504 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 PRR23BQ6ZRT6 265 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 RFX8Q6ZV50 586 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 LZTR1Q8N653 840 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SPC24Q8NBT2 197 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 CALR3Q96L12 384 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 SPON2Q9BUD6 331 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 CEP44Q9C0F1 390 aa15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 CWC15Q9P013 229 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-210ENST00000442216 CBX4O00257 560 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ALOX15BO15296 676 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 DAPK3O43293 454 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 KDELR3O43731 214 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 GFRA3O60609 400 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 KRT7P08729 469 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 GOT1P17174 413 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ERCC2P18074 760 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 SLC1A1P43005 524 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 MRE11P49959 708 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 SERPINH1P50454 418 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ARF5P84085 180 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 DPYSQ14117 519 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ELAVL3Q14576 367 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 MESDQ14696 234 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ELF2Q15723 593 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 SMTNL2Q2TAL5 461 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ACCSLQ4AC99 568 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 KCNT1Q5JUK3 1230 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 PMS2CLQ68D20 193 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 KIAA1324Q6UXG2 1013 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ASCL5Q7RTU5 278 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 KBTBD6Q86V97 674 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 TMEM139Q8IV31 216 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 FAM160A2Q8N612 972 aaPredicted RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 ATP11CQ8NB49 1132 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 HSPH1Q92598 858 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 CCDC114Q96M63 670 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 DUSP15Q9H1R2 295 aaPredicted RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 NOL6Q9H6R4 1146 aaKnown RBP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
CSNK1E-210ENST00000442216 IGHV1OR15-9A0A0B4J2B8 117 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RASA4BC9J798 803 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RASA4O43374 803 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 MT-CO1P00395 513 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 DNTTP04053 509 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RETP07949 1114 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 ACVRL1P37023 503 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 SSR1P43307 286 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 TPMTP51580 245 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RPS14P62263 151 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 PDK2Q15119 407 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 TTC31Q49AM3 519 aaPredicted RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RAD9BQ6WBX8 426 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 USP30Q70CQ3 517 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 TXLNBQ8N3L3 684 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RLN3Q8WXF3 142 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 OR8D1Q8WZ84 308 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 TSC1Q92574 1164 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 RUBCNQ92622 972 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 ISG20Q96AZ6 181 aaKnown RBP15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 ERLEC1Q96DZ1 483 aa15.36■□□□□ 0.05
CSNK1E-210ENST00000442216 FAM129BQ96TA1 746 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms