RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 IPO11Q9UI26 975 aaKnown RBP13.44□□□□□ -0.26
CPSF4-206ENST00000441580 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 FAM169AQ9Y6X4 670 aa13.44□□□□□ -0.26
CPSF4-206ENST00000441580 DRGXA6NNA5 263 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 CXorf49A8MYA2 514 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 COPEO14579 308 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RAMP2O60895 175 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ABLIM3O94929 683 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 TIMP1P01033 207 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 HLA-DQB2P05538 268 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RPA3P35244 121 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ATP5C1P36542 298 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 GP5P40197 560 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ALDH1A3P47895 512 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 SLC11A2P49281 568 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 PAPOLAP51003 745 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RENBPP51606 427 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 YBEYP58557 167 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 WDR5P61964 334 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 MPP3Q13368 585 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 HNRNPDQ14103 355 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 BTG3Q14201 252 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ZKSCAN8Q15776 578 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 DBN1Q16643 649 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 HECTD3Q5T447 861 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RASIP1Q5U651 963 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RAP1GAP2Q684P5 730 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 LVRNQ6Q4G3 990 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 PIGWQ7Z7B1 504 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 DDX53Q86TM3 631 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 TRIM42Q8IWZ5 723 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 TMEM199Q8N511 208 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF461Q8TAF7 563 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ZSCAN18Q8TBC5 510 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 GIPC2Q8TF65 315 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 OXNAD1Q96HP4 312 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 MYRFLQ96LU7 910 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RPRD1AQ96P16 312 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 CPNE1Q99829 537 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 PAIP2Q9BPZ3 127 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 FSD1LQ9BXM9 530 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 CCSER2Q9H7U1 834 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 MRM3Q9HC36 420 aaKnown RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 ENTPD7Q9NQZ7 604 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 VPS45Q9NRW7 570 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 FGFR1OP2Q9NVK5 253 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 SPG21Q9NZD8 308 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 MPP6Q9NZW5 540 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 MAGED2Q9UNF1 606 aaPredicted RBP13.43□□□□□ -0.26
CPSF4-206ENST00000441580 RPS6KL1Q9Y6S9 549 aa13.43□□□□□ -0.26
CPSF4-206ENST00000441580 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 ADAM12O43184 909 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 SNX3O60493 162 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TAC1P20366 129 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TACR2P21452 398 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 HARS2P49590 506 aaKnown RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 IL10RBQ08334 325 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 RAB33AQ14088 237 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TAF12Q16514 161 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 C5orf22Q49AR2 442 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 FBXL22Q6P050 247 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 C6orf89Q6UWU4 347 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 PACS1Q6VY07 963 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 ARHGAP36Q6ZRI8 547 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 CCDC121Q6ZUS5 278 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TFAP2DQ7Z6R9 452 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TMEM135Q86UB9 458 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 CNTD1Q8N815 330 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 PPHLN1Q8NEY8 458 aaKnown RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 TCP10LQ8TDR4 215 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 USP33Q8TEY7 942 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 AZIN2Q96A70 460 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 HMCESQ96FZ2 354 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 SERAC1Q96JX3 654 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF599Q96NL3 588 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 DDX50Q9BQ39 737 aaKnown RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 VPS11Q9H270 941 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 SSX2IPQ9Y2D8 614 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 USP15Q9Y4E8 981 aaPredicted RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 MYO18AQ92614 2054 aaKnown RBP13.42□□□□□ -0.26
CPSF4-206ENST00000441580 PLXNA4Q9HCM2 1894 aa13.42□□□□□ -0.26
CPSF4-206ENST00000441580 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 ACSL4O60488 711 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 LATS1O95835 1130 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 HMBSP08397 361 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 DHRS4L1P0CG22 281 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 RPL17P18621 184 aaKnown RBP13.41□□□□□ -0.26
CPSF4-206ENST00000441580 ADRA1DP25100 572 aa13.41□□□□□ -0.26
CPSF4-206ENST00000441580 CSE1LP55060 971 aaKnown RBP13.41□□□□□ -0.26
CPSF4-206ENST00000441580 CRADDP78560 199 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms