RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CDH7Q9ULB5 785 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 EMCNQ9ULC0 261 aa17.12■□□□□ 0.33
PMS1-213ENST00000441310 A0A087WXM4 84 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 B4GALT5O43286 388 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 ME2P23368 584 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 PIK3R1P27986 724 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 GALNT18Q6P9A2 607 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 DARS2Q6PI48 645 aaKnown RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 TMA16Q96EY4 203 aaKnown RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 CCDC68Q9H2F9 335 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 H0YCG3 227 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 RFC1P35251 1148 aaPredicted RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 DPP6P42658 865 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 GABRB2P47870 512 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 NEK2P51955 445 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 LAMTOR4Q0VGL1 99 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 MTX3Q5HYI7 312 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 TTC33Q6PID6 262 aaPredicted RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 NPNTQ6UXI9 565 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 HM13Q8TCT9 377 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 MAPK15Q8TD08 544 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 GPR20Q99678 358 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 MTMR12Q9C0I1 747 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 TRPV5Q9NQA5 729 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 UTP6Q9NYH9 597 aaKnown RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 ERGIC3Q9Y282 383 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 SPO11Q9Y5K1 396 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 JAK1P23458 1154 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 EPHX2P34913 555 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 PMS2P3Q13401 168 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 PCLAFQ15004 111 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 MOGQ16653 247 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 ANKRD26P1Q6NSI1 321 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 C15orf39Q6ZRI6 1047 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 PHF13Q86YI8 300 aaPredicted RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 SGF29Q96ES7 293 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 EHD1Q9H4M9 534 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 POPDC2Q9HBU9 364 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
PMS1-213ENST00000441310 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
PMS1-213ENST00000441310 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
PMS1-213ENST00000441310 CKMT2P17540 419 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 GJA5P36382 358 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 GSSP48637 474 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 TFAMQ00059 246 aaKnown RBP17.1■□□□□ 0.33
PMS1-213ENST00000441310 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.33
PMS1-213ENST00000441310 LDLRAP1Q5SW96 308 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 DEPDC1BQ8WUY9 529 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 CGREF1Q99674 301 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 WDR55Q9H6Y2 383 aaPredicted RBP17.1■□□□□ 0.33
PMS1-213ENST00000441310 PLAC1Q9HBJ0 212 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 PHKG1Q16816 387 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 PERM1Q5SV97 790 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 ZNF781Q8N8C0 355 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 HGH1Q9BTY7 390 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 FRMD8Q9BZ67 464 aaPredicted RBP17.1■□□□□ 0.33
PMS1-213ENST00000441310 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 PCSK1NQ9UHG2 260 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 POU2F3Q9UKI9 436 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 PTPRFP10586 1907 aa17.1■□□□□ 0.33
PMS1-213ENST00000441310 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 APOEP02649 317 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 GNAO1P09471 354 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 C1QBPQ07021 282 aaKnown RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 CYP4A22Q5TCH4 519 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ENOSF1Q7L5Y1 443 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 LRRN4Q8WUT4 740 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 DLG3Q92796 817 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ARPC5LQ9BPX5 153 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ACSS2Q9NR19 701 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 AP4S1Q9Y587 144 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ARID2Q68CP9 1835 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 EVPLQ92817 2033 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 CXCL11O14625 94 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 PFDN6O15212 129 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 HTRA2O43464 458 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 OSBPP22059 807 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 NR4A1P22736 598 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 KCNC4Q03721 635 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ZBTB17Q13105 803 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 CAMK2BQ13554 666 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 CUL2Q13617 745 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 KCNJ11Q14654 390 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 UNC5AQ6ZN44 842 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 BBS12Q6ZW61 710 aa17.09■□□□□ 0.33
PMS1-213ENST00000441310 ZC3H7AQ8IWR0 971 aaKnown RBP17.09■□□□□ 0.33
PMS1-213ENST00000441310 PPWD1Q96BP3 646 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms