RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PDZD7Q9H5P4 517 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 CAAP1Q9H8G2 361 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 OLAHQ9NV23 265 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 COQ6Q9Y2Z9 468 aa12.13□□□□□ -0.47
LTBR-203ENST00000441074 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
LTBR-203ENST00000441074 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 SLC22A2O15244 555 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 CST3P01034 146 aaPredicted RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 MX2P20592 715 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 CTGFP29279 349 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 HOXD12P35452 270 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 SERPINB5P36952 375 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 TNFSF9P41273 254 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 CCR3P51677 355 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 OSTNP61366 133 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZNF699Q32M78 642 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ITPRIPL1Q6GPH6 555 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 DENND1BQ6P3S1 775 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 C4orf22Q6V702 233 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 GPR180Q86V85 440 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 MPP5Q8N3R9 675 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 EMC1Q8N766 993 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 GRIN3AQ8TCU5 1115 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ITPKCQ96DU7 683 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 KLHL32Q96NJ5 620 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 FUOMA2VDF0 154 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ACOT8O14734 319 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 RBL1P28749 1068 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 HALP42357 657 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 CDH6P55285 790 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 PKNOX1P55347 436 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ESRRGP62508 458 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 SLC10A2Q12908 348 aaPredicted RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 IKBKEQ14164 716 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZNF829Q3KNS6 432 aaPredicted RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 ANKDD1AQ495B1 522 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZBED5Q49AG3 693 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZNF394Q53GI3 561 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 FAM182AQ5T1J6 154 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 GPR141Q7Z602 305 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ZNF781Q8N8C0 355 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ISOC1Q96CN7 298 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 ARHGAP39Q9C0H5 1083 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 HIPK3Q9H422 1215 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 COQ10BQ9H8M1 238 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 CLK4Q9HAZ1 481 aaKnown RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 TUBA8Q9NY65 449 aaPredicted RBP12.12□□□□□ -0.47
LTBR-203ENST00000441074 TMEM216Q9P0N5 145 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 TMED5Q9Y3A6 229 aa12.12□□□□□ -0.47
LTBR-203ENST00000441074 HTR3EA5X5Y0 456 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 TRIM64CA6NLI5 447 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 FBP2O00757 339 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 OGTO15294 1046 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 HSPA4LO95757 839 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 VTNP04004 478 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 COL6A2P12110 1019 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CD1EP15812 388 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 TPSB2P20231 275 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 ASPAP45381 313 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 NIPAL4Q0D2K0 466 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 NRF1Q16656 503 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 STEAP4Q687X5 459 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 DCDC5Q6ZRR9 648 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 SLC15A3Q8IY34 581 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 PLD5Q8N7P1 536 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 MAPK15Q8TD08 544 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 SGF29Q96ES7 293 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 RNF157Q96PX1 679 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 OR52B2Q96RD2 323 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 TMEM79Q9BSE2 394 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 SLC4A5Q9BY07 1137 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 SLC38A7Q9NVC3 462 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 ASNSD1Q9NWL6 643 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 FADS3Q9Y5Q0 445 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 THSD7BQ9C0I4 1608 aa12.11□□□□□ -0.47
LTBR-203ENST00000441074 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
LTBR-203ENST00000441074 SOBPA7XYQ1 873 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms