RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PEX11BO96011 259 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 HLA-DQB2P05538 268 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 HNRNPA1P09651 372 aaKnown RBP eCLIP19.5■□□□□ 0.71
SNX17-203ENST00000440760 IFI35P80217 286 aaPredicted RBP19.5■□□□□ 0.71
SNX17-203ENST00000440760 ZNF33AQ06730 810 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 BBS7Q8IWZ6 715 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 FBXO36Q8NEA4 188 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 OR7D4Q8NG98 312 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 PABPC5Q96DU9 382 aaKnown RBP19.5■□□□□ 0.71
SNX17-203ENST00000440760 MED4Q9NPJ6 270 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 UBP1Q9NZI7 540 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 STOML2Q9UJZ1 356 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 SH3BP1Q9Y3L3 701 aa19.5■□□□□ 0.71
SNX17-203ENST00000440760 LEFTY2O00292 366 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 ALOX15BO15296 676 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 RNF40O75150 1001 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 CDH4P55283 916 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 TIGD7Q6NT04 549 aaPredicted RBP19.49■□□□□ 0.71
SNX17-203ENST00000440760 POTEHQ6S545 545 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 EPS8L3Q8TE67 593 aaKnown RBP19.49■□□□□ 0.71
SNX17-203ENST00000440760 IL12RB2Q99665 862 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 MLPHQ9BV36 600 aaPredicted RBP19.49■□□□□ 0.71
SNX17-203ENST00000440760 PRKD2Q9BZL6 878 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 CENPHQ9H3R5 247 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 LSM7Q9UK45 103 aaKnown RBP19.49■□□□□ 0.71
SNX17-203ENST00000440760 TRHDEQ9UKU6 1024 aa19.49■□□□□ 0.71
SNX17-203ENST00000440760 A0A1B0GVM2 712 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 TCAF2A6NFQ2 919 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 USP12O75317 370 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 CEBPBP17676 345 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 ELK3P41970 407 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 SERINC3Q13530 473 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 DUSP6Q16828 381 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 KRT71Q3SY84 523 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 PARP15Q460N3 678 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 PRSS36Q5K4E3 855 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 TMC5Q6UXY8 1006 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 PPP1R21Q6ZMI0 780 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 CEP128Q6ZU80 1094 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 RTL10Q7L3V2 364 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 CMTM8Q8IZV2 173 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 OXNAD1Q96HP4 312 aaPredicted RBP19.48■□□□□ 0.71
SNX17-203ENST00000440760 VAT1Q99536 393 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 RBM22Q9NW64 420 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX17-203ENST00000440760 ZDHHC7Q9NXF8 308 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 DONSONQ9NYP3 566 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 POLR3GO15318 223 aaPredicted RBP19.48■□□□□ 0.71
SNX17-203ENST00000440760 TBL1XO60907 577 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 CLDN11O75508 207 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 ZNF189O75820 626 aaPredicted RBP19.48■□□□□ 0.71
SNX17-203ENST00000440760 PRAMEF12O95522 483 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 LATS1O95835 1130 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 AVPR1AP37288 418 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 SLCO1A2P46721 670 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 KCTD16Q68DU8 428 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 ITPRIPL1Q6GPH6 555 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 MPP5Q8N3R9 675 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 MCUQ8NE86 351 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 SPATA22Q8NHS9 363 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 SH3RF2Q8TEC5 729 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 PYROXD1Q8WU10 500 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 MAML1Q92585 1016 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 ARHGEF2Q92974 986 aaKnown RBP19.48■□□□□ 0.71
SNX17-203ENST00000440760 VPS37BQ9H9H4 285 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 ACTL7AQ9Y615 435 aa19.48■□□□□ 0.71
SNX17-203ENST00000440760 OPA1O60313 960 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 C1RP00736 705 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 RHOCP08134 193 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 GLDCP23378 1020 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 SSTR1P30872 391 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 GPX6P59796 221 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 CBX1P83916 185 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 GNA12Q03113 381 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 SLC10A7Q0GE19 358 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 ARHGAP15Q53QZ3 475 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 CXorf57Q6NSI4 855 aaKnown RBP19.47■□□□□ 0.71
SNX17-203ENST00000440760 SH2D3CQ8N5H7 860 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 SMG7Q92540 1137 aaKnown RBP19.47■□□□□ 0.71
SNX17-203ENST00000440760 ZSWIM3Q96MP5 696 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 DDX50Q9BQ39 737 aaKnown RBP19.47■□□□□ 0.71
SNX17-203ENST00000440760 TRIM56Q9BRZ2 755 aaKnown RBP19.47■□□□□ 0.71
SNX17-203ENST00000440760 PHACTR1Q9C0D0 580 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 EIF2B3Q9NR50 452 aaKnown RBP19.47■□□□□ 0.71
SNX17-203ENST00000440760 CDH22Q9UJ99 828 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 ARHGAP26Q9UNA1 814 aa19.47■□□□□ 0.71
SNX17-203ENST00000440760 GFRA2O00451 464 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 EIF3HO15372 352 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNX17-203ENST00000440760 NEBLO76041 1014 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 HOXD9P28356 352 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 ETFBP38117 255 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 MAGEA3P43357 314 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 MAXP61244 160 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 CBX2Q14781 532 aaPredicted RBP19.46■□□□□ 0.71
SNX17-203ENST00000440760 LONRF1Q17RB8 773 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 SKIDA1Q1XH10 827 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 HTR3DQ70Z44 454 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 CHST9Q7L1S5 443 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 LRRC49Q8IUZ0 686 aa19.46■□□□□ 0.71
SNX17-203ENST00000440760 TNS4Q8IZW8 715 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms