RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 SYCP2LQ5T4T6 812 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 C6orf118Q5T5N4 469 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 UBAP2Q5T6F2 1119 aaKnown RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 TIGD7Q6NT04 549 aaPredicted RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 OR7D4Q8NG98 312 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 RSPRY1Q96DX4 576 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 AGAP3Q96P47 875 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 FOXP3Q9BZS1 431 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 PDFQ9HBH1 243 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 KLHL8Q9P2G9 620 aaPredicted RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 SHROOM3Q8TF72 1996 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 ATP8B1O43520 1251 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 CACNG3O60359 315 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 PSMB4P28070 264 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 GRIN2CQ14957 1233 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 WFDC5Q8TCV5 224 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 DNAJC17Q9NVM6 304 aaKnown RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 HPCAL4Q9UM19 191 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 ATP8A1Q9Y2Q0 1164 aa28.54■■■□□ 2.16
CGREF1-207ENST00000440612 PRRC2BQ5JSZ5 2229 aaKnown RBP28.54■■■□□ 2.16
CGREF1-207ENST00000440612 GOLGA8MH3BSY2 632 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 SMAPO00193 183 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 FSHRP23945 695 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 FDFT1P37268 417 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 DLX2Q07687 328 aaPredicted RBP28.53■■■□□ 2.16
CGREF1-207ENST00000440612 IL10RBQ08334 325 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 CTC1Q2NKJ3 1217 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 MPP7Q5T2T1 576 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 FGF13Q92913 245 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 ACE2Q9BYF1 805 aaPredicted RBP28.53■■■□□ 2.16
CGREF1-207ENST00000440612 GBA3Q9H227 469 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 S1PR5Q9H228 398 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 MTCH2Q9Y6C9 303 aa28.53■■■□□ 2.16
CGREF1-207ENST00000440612 A0A1W2PPC1 479 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 F5H423 210 aaPredicted RBP28.52■■■□□ 2.16
CGREF1-207ENST00000440612 PRAMEF11O60813 436 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 LUC7L3O95232 432 aaKnown RBP28.52■■■□□ 2.16
CGREF1-207ENST00000440612 HSD17B3P37058 310 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 CBLBQ13191 982 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 ADGRE1Q14246 886 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 FYB2Q5VWT5 728 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 RELL1Q8IUW5 271 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 KLHDC8BQ8IXV7 354 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 TEX26Q8N6G2 289 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 USP33Q8TEY7 942 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 EXOC4Q96A65 974 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 LINC00597Q9H2U6 94 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 SEMA4AQ9H3S1 761 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 CLEC4EQ9ULY5 219 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 OR51B4Q9Y5P0 310 aa28.52■■■□□ 2.16
CGREF1-207ENST00000440612 APRTP07741 180 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 RHOCP08134 193 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 TPSB2P20231 275 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 TNK2Q07912 1038 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 HNRNPDQ14103 355 aaKnown RBP28.51■■■□□ 2.16
CGREF1-207ENST00000440612 TPSAB1Q15661 275 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 MSS51Q4VC12 460 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 MPPE1Q53F39 396 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 FAM78AQ5JUQ0 283 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 FNBP1LQ5T0N5 605 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 ZNF534Q76KX8 674 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 CCDC25Q86WR0 208 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 ALG14Q96F25 216 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 RBM15Q96T37 977 aaKnown RBP eCLIP28.51■■■□□ 2.16
CGREF1-207ENST00000440612 TSPYL1Q9H0U9 437 aa28.51■■■□□ 2.16
CGREF1-207ENST00000440612 COLQQ9Y215 455 aaPredicted RBP28.51■■■□□ 2.16
CGREF1-207ENST00000440612 TBX10O75333 385 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 HLA-DQB2P05538 268 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 HOXB8P17481 243 aaPredicted RBP28.51■■■□□ 2.15
CGREF1-207ENST00000440612 NFKB1P19838 968 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 NUMBP49757 651 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 SLC10A7Q0GE19 358 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 SLMAPQ14BN4 828 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 TPGS1Q6ZTW0 290 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 IQCKQ8N0W5 287 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 CARNMT1Q8N4J0 409 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 BHMTQ93088 406 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 WDR83Q9BRX9 315 aaKnown RBP28.51■■■□□ 2.15
CGREF1-207ENST00000440612 VIPAS39Q9H9C1 493 aa28.51■■■□□ 2.15
CGREF1-207ENST00000440612 NUP210Q8TEM1 1887 aaPredicted RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 POU3F3P20264 500 aaPredicted RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 PMS2P54278 862 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 COL19A1Q14993 1142 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 ZNF783Q6ZMS7 281 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 OTOP3Q7RTS5 596 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 CAND1Q86VP6 1230 aaKnown RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 TMEM25Q86YD3 366 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 CELF5Q8N6W0 485 aaKnown RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 MCUQ8NE86 351 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 DDI1Q8WTU0 396 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 ASB16Q96NS5 453 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 MLPHQ9BV36 600 aaPredicted RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 SP110Q9HB58 689 aa28.5■■■□□ 2.15
CGREF1-207ENST00000440612 EIF2B3Q9NR50 452 aaKnown RBP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 RBM22Q9NW64 420 aaKnown RBP eCLIP28.5■■■□□ 2.15
CGREF1-207ENST00000440612 TMEM265A0A087WTH1 108 aa28.49■■■□□ 2.15
CGREF1-207ENST00000440612 E7ESA3 106 aa28.49■■■□□ 2.15
CGREF1-207ENST00000440612 KDELR3O43731 214 aa28.49■■■□□ 2.15
CGREF1-207ENST00000440612 GLDCP23378 1020 aa28.49■■■□□ 2.15
CGREF1-207ENST00000440612 MZF1P28698 734 aaPredicted RBP28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms