RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 TCRBV21S2A2A0A5A6 115 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 LRRD1A4D1F6 860 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 H0Y858 1186 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 KRT1P04264 644 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 TDGF1P13385 188 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 COL9A1P20849 921 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 GLDCP23378 1020 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 IL4RP24394 825 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 VASPP50552 380 aaPredicted RBP18.69■□□□□ 0.58
PTX4-202ENST00000440447 PTPN5P54829 565 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 SLC20A2Q08357 652 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 MMRN1Q13201 1228 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 KIAA1211LQ6NV74 962 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 TMCO3Q6UWJ1 677 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 SYCE1Q8N0S2 351 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 ZNF366Q8N895 744 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 RAPGEF5Q92565 580 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 CELF6Q96J87 481 aaKnown RBP18.69■□□□□ 0.58
PTX4-202ENST00000440447 FAM126AQ9BYI3 521 aaPredicted RBP18.69■□□□□ 0.58
PTX4-202ENST00000440447 IRF2BPLQ9H1B7 796 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 GUCA1BQ9UMX6 200 aa18.69■□□□□ 0.58
PTX4-202ENST00000440447 GRID2IPA4D2P6 1211 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ARHGAP42A6NI28 874 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 TTC34A8MYJ7 566 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 DCLK1O15075 740 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 KDELR3O43731 214 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 PXNP49023 591 aaPredicted RBP18.68■□□□□ 0.58
PTX4-202ENST00000440447 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 TCF15Q12870 199 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 HNRNPA1L2Q32P51 320 aaKnown RBP18.68■□□□□ 0.58
PTX4-202ENST00000440447 ACCSLQ4AC99 568 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ANKRD20A8PQ5CZ79 823 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 HEATR6Q6AI08 1181 aaKnown RBP18.68■□□□□ 0.58
PTX4-202ENST00000440447 ANO7Q6IWH7 933 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 SH2D3CQ8N5H7 860 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ATP11CQ8NB49 1132 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ERLEC1Q96DZ1 483 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 HMCESQ96FZ2 354 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ZNF830Q96NB3 372 aaPredicted RBP18.68■□□□□ 0.58
PTX4-202ENST00000440447 KLC2Q9H0B6 622 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 LRRC19Q9H756 370 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ETNK2Q9NVF9 386 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.58
PTX4-202ENST00000440447 HS3ST2Q9Y278 367 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ZNF318Q5VUA4 2279 aa18.68■□□□□ 0.58
PTX4-202ENST00000440447 ATG2BQ96BY7 2078 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 CXorf51AA0A1B0GTR3 108 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 TARSL2A2RTX5 802 aaKnown RBP18.67■□□□□ 0.58
PTX4-202ENST00000440447 ATP9BO43861 1147 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 PALMO75781 387 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 ZMPSTE24O75844 475 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 MT-CO1P00395 513 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 SRCP12931 536 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 SERPINB6P35237 376 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 FNTBP49356 437 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 GEMIN4P57678 1058 aaKnown RBP18.67■□□□□ 0.58
PTX4-202ENST00000440447 SERINC3Q13530 473 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 LINGO4Q6UY18 593 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 ZNF662Q6ZS27 426 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 VSIG1Q86XK7 387 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 PGBD3Q8N328 593 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 LRRC57Q8N9N7 239 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 HMGB4Q8WW32 186 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 RNF25Q96BH1 459 aaPredicted RBP18.67■□□□□ 0.58
PTX4-202ENST00000440447 SLC39A8Q9C0K1 460 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 CD248Q9HCU0 757 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 ZSCAN32Q9NX65 697 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 EBF1Q9UH73 591 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 PPP2R2CQ9Y2T4 447 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 DOCK4Q8N1I0 1966 aa18.67■□□□□ 0.58
PTX4-202ENST00000440447 CCDC163A0A0D9SF12 145 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 ZSCAN5CA6NGD5 496 aaPredicted RBP18.66■□□□□ 0.58
PTX4-202ENST00000440447 ZNF487B1APH4 448 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 DFFAO00273 331 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 AXIN1O15169 862 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 PAPOLAP51003 745 aaKnown RBP18.66■□□□□ 0.58
PTX4-202ENST00000440447 CLCN6P51797 869 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 ARF5P84085 180 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 DMWDQ09019 674 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 CAMK2GQ13555 558 aaPredicted RBP18.66■□□□□ 0.58
PTX4-202ENST00000440447 DLG2Q15700 870 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 AFMIDQ63HM1 303 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 WDR5BQ86VZ2 330 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 LONP2Q86WA8 852 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 RASSF3Q86WH2 238 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 ARHGAP12Q8IWW6 846 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 KATNAL2Q8IYT4 538 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 NPWQ8N729 165 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 OR2T3Q8NH03 318 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 PCDH19Q8TAB3 1148 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 NELL1Q92832 810 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 FAF2Q96CS3 445 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 RNF157Q96PX1 679 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
PTX4-202ENST00000440447 KCNF1Q9H3M0 494 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 MTG2Q9H4K7 406 aa18.66■□□□□ 0.58
PTX4-202ENST00000440447 FBRSQ9HAH7 460 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms