RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SRSF5Q13243 272 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 MESDQ14696 234 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 PPP6R3Q5H9R7 873 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 C9orf64Q5T6V5 341 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 IL31Q6EBC2 164 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 KIAA1324Q6UXG2 1013 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 PRR23BQ6ZRT6 265 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 TMEM139Q8IV31 216 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 ATP11CQ8NB49 1132 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 FAM71BQ8TC56 605 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 HSPH1Q92598 858 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 PTPRN2Q92932 1015 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 RSPH9Q9H1X1 276 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 CWC15Q9P013 229 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 RCOR3Q9P2K3 495 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
HSPG2-206ENST00000439717 DMDP11532 3685 aa12.09□□□□□ -0.47
HSPG2-206ENST00000439717 CKAP5Q14008 2032 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 PRR23AA6NEV1 266 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ZSCAN5CA6NGD5 496 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 CBX4O00257 560 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 KDELR3O43731 214 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 RHOBTB1O94844 696 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ACADMP11310 421 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ERCC2P18074 760 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 GLDCP23378 1020 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 OXTRP30559 389 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ACVRL1P37023 503 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 NUMBP49757 651 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 RPS14P62263 151 aaKnown RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ARF5P84085 180 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 DPYSQ14117 519 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 KRT81Q14533 505 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ELAVL3Q14576 367 aaKnown RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 DLG2Q15700 870 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ELF2Q15723 593 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 SPDYCQ5MJ68 293 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ZNF776Q68DI1 518 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 LAIR1Q6GTX8 287 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 SLC36A4Q6YBV0 504 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 POLNQ7Z5Q5 900 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 TSC1Q92574 1164 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 LOXL4Q96JB6 756 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 NOL6Q9H6R4 1146 aaKnown RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 LRRC19Q9H756 370 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 GRPEL1Q9HAV7 217 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 PCDH18Q9HCL0 1135 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
HSPG2-206ENST00000439717 SCML1Q9UN30 329 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 MYO15AQ9UKN7 3530 aa12.08□□□□□ -0.48
HSPG2-206ENST00000439717 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 TMEM110-MUSTN1A8MSY1 372 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 RASA4BC9J798 803 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 DCLK1O15075 740 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 ALOX15BO15296 676 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 MAP3K13O43283 966 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 RASA4O43374 803 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 MT-CO1P00395 513 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 DNTTP04053 509 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 NOP2P46087 812 aaKnown RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 SERPINH1P50454 418 aaKnown RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 ARSEP51690 589 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 CDH6P55285 790 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 TAS2R40P59535 323 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 SERINC3Q13530 473 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 PDK2Q15119 407 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 PLK5Q496M5 336 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 LRRC38Q5VT99 294 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 LINGO4Q6UY18 593 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 ASCL5Q7RTU5 278 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 DSG4Q86SJ6 1040 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 KBTBD6Q86V97 674 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 MAP7D3Q8IWC1 876 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 CASKIN2Q8WXE0 1202 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 RLN3Q8WXF3 142 aa12.07□□□□□ -0.48
HSPG2-206ENST00000439717 ISG20Q96AZ6 181 aaKnown RBP12.07□□□□□ -0.48
HSPG2-206ENST00000439717 CCDC114Q96M63 670 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms