RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 C12orf49Q9H741 205 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CATSPERBQ9H7T0 1116 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 RXFP1Q9HBX9 757 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 WDR6Q9NNW5 1121 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARHGEF4Q9NR80 690 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 GPATCH2LQ9NWQ4 482 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTMR10Q9NXD2 777 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARHGEF38Q9NXL2 777 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM53CQ9NYF3 392 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 GRHL1Q9NZI5 618 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CWC15Q9P013 229 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 MARCH2Q9P0N8 246 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 COX16Q9P0S2 106 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAK5Q9P286 719 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 UXTQ9UBK9 157 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HPCAL4Q9UM19 191 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 SHOC2Q9UQ13 582 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 LZTS1Q9Y250 596 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 TLR6Q9Y2C9 796 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 NEU2Q9Y3R4 380 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HBS1LQ9Y450 684 aaKnown RBP4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 ASB3Q9Y575 518 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 HEY1Q9Y5J3 304 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLUHO75153 1309 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 CHD9Q3L8U1 2897 aa4.09□□□□□ -1.75
HMGB1P37-201ENST00000439613 COL4A6Q14031 1691 aa4.09□□□□□ -1.76
HMGB1P37-201ENST00000439613 PTPRSQ13332 1948 aa4.09□□□□□ -1.76
HMGB1P37-201ENST00000439613 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.76
HMGB1P37-201ENST00000439613 BRCA2P51587 3418 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 A0A0A0MRY4 1105 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM238LA0A1B0GVL6 79 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 WDR27A2RRH5 827 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 C5orf60A6NFR6 353 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNU1A8MYU2 1149 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GOLGA8KD6RF30 607 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DNALI1O14645 258 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 EIF3HO15372 352 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ADAM12O43184 909 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PAGE1O75459 146 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GCATO75600 419 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FGF18O76093 207 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 VNN2O95498 520 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CXCL14O95715 111 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FGF19O95750 216 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 IFNB1P01574 187 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 RB1P06400 928 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM153BP0C7A2 387 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CTSAP10619 480 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATP2A2P16615 1042 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GOT1P17174 413 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 LAMA2P24043 3122 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 COL8A1P27658 744 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 RPL22P35268 128 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATP5C1P36542 298 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 BMPR1AP36894 532 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 HSD17B3P37058 310 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TUBP50607 506 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CDR1P51861 262 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 RABGGTBP53611 331 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ITGA8P53708 1063 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ATXN1P54253 815 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PMS2P54278 862 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 MLLT6P55198 1093 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TBX4P57082 545 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 RAC1P63000 192 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PITX1P78337 314 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SARNPP82979 210 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DAB2P98082 770 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 UBE3AQ05086 875 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 EFEMP1Q12805 493 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SEMA3BQ13214 749 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 EIF4EBP2Q13542 120 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TRADDQ15628 312 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 FAM153CQ494X1 144 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PABPC1LQ4VXU2 614 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 SLC45A4Q5BKX6 768 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PRRT3Q5FWE3 981 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM240Q5SV17 173 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 HECTD3Q5T447 861 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 IZUMO3Q5VZ72 239 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DENND4CQ5VZ89 1909 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 NUGGCQ68CJ6 796 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DENND2CQ68D51 928 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 HEATR6Q6AI08 1181 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 HIBCHQ6NVY1 386 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZDHHC24Q6UX98 284 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ARHGEF18Q6ZSZ5 1173 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCDC149Q6ZUS6 474 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMC3Q7Z5M5 1100 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ALYREFQ86V81 257 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZC3H18Q86VM9 953 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 RELL1Q8IUW5 271 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 UNC45BQ8IWX7 931 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 PPIL6Q8IXY8 311 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 GSPT2Q8IYD1 628 aaKnown RBP4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 C7orf61Q8IZ16 206 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 ELMOD1Q8N336 334 aa4.08□□□□□ -1.76
HMGB1P37-201ENST00000439613 DTWD1Q8N5C7 304 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms