RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 VASPP50552 380 aaPredicted RBP16.9■□□□□ 0.3
TOM1-207ENST00000439512 ZNF75DP51815 510 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 ZBTB16Q05516 673 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 CSRP2Q16527 193 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 SPDYCQ5MJ68 293 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 ERMARDQ5T6L9 678 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 IL31Q6EBC2 164 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 LINGO4Q6UY18 593 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 CYP2U1Q7Z449 544 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
TOM1-207ENST00000439512 SH2D3CQ8N5H7 860 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 DCAF4L2Q8NA75 395 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 ATP11CQ8NB49 1132 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 GANCQ8TET4 914 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 BTBD6Q96KE9 485 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 PEBP4Q96S96 227 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 FAM129BQ96TA1 746 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 GPR174Q9BXC1 333 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 SMOC1Q9H4F8 434 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
TOM1-207ENST00000439512 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 AP4E1Q9UPM8 1137 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
TOM1-207ENST00000439512 THADAQ6YHU6 1953 aa16.89■□□□□ 0.3
TOM1-207ENST00000439512 NUP205Q92621 2012 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 K7ERQ8 282 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 BNIP3LO60238 219 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 LRCH4O75427 683 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 SRCP12931 536 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 ZNF33AQ06730 810 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 PIGHQ14442 188 aaPredicted RBP16.89■□□□□ 0.29
TOM1-207ENST00000439512 ACAP1Q15027 740 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 CA9Q16790 459 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 PLA2G2CQ5R387 149 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 LYSMD4Q5XG99 296 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 RETSATQ6NUM9 610 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 NCAPGQ9BPX3 1015 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 PACSIN1Q9BY11 444 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 IP6K2Q9UHH9 426 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 ANAPC7Q9UJX3 599 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 HS3ST2Q9Y278 367 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 CEP192Q8TEP8 1941 aa16.89■□□□□ 0.29
TOM1-207ENST00000439512 CHD5Q8TDI0 1954 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 MYO1FO00160 1098 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 RAMP2O60895 175 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 ZMPSTE24O75844 475 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 IGLV3-19P01714 112 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 SLC8A1P32418 973 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 PCK1P35558 622 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 ETFBP38117 255 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 TPI1P60174 286 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 POLD3Q15054 466 aaPredicted RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 SF3A2Q15428 464 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 CST6Q15828 149 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 TTC31Q49AM3 519 aaPredicted RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 Q6ZVU0 165 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 RTL3Q8N8U3 475 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 CTNNBL1Q8WYA6 563 aaPredicted RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 ARHGEF2Q92974 986 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 ZNF419Q96HQ0 510 aaPredicted RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 HSPA12BQ96MM6 686 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 SNRNP25Q9BV90 132 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 ACE2Q9BYF1 805 aaPredicted RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 MAGEH1Q9H213 219 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 PABPC3Q9H361 631 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 CATSPERBQ9H7T0 1116 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 VPS45Q9NRW7 570 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 TMEM74BQ9NUR3 256 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 FBXL12Q9NXK8 326 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 CTTNBP2NLQ9P2B4 639 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 NCKAP1Q9Y2A7 1128 aa16.88■□□□□ 0.29
TOM1-207ENST00000439512 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.88■□□□□ 0.29
TOM1-207ENST00000439512 RALGAPA1Q6GYQ0 2036 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 EEF2KO00418 725 aaKnown RBP16.87■□□□□ 0.29
TOM1-207ENST00000439512 MID1O15344 667 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 DAPK3O43293 454 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 IL1BP01584 269 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 ITPKAP23677 461 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 ACSL1P33121 698 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 PSMD8P48556 350 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 SLC20A2Q08357 652 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 ELAVL3Q14576 367 aaKnown RBP16.87■□□□□ 0.29
TOM1-207ENST00000439512 BOLA3Q53S33 107 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 PPP6R3Q5H9R7 873 aaPredicted RBP16.87■□□□□ 0.29
TOM1-207ENST00000439512 PRR23CQ6ZRP0 262 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 CYP4V2Q6ZWL3 525 aaPredicted RBP16.87■□□□□ 0.29
TOM1-207ENST00000439512 ZNF354CQ86Y25 554 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 TC2NQ8N9U0 490 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 OR8D1Q8WZ84 308 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
TOM1-207ENST00000439512 KCTD15Q96SI1 283 aaPredicted RBP16.87■□□□□ 0.29
TOM1-207ENST00000439512 OMDQ99983 421 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms