RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 OXCT1P55809 520 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 YBX1P67809 324 aaKnown RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 BTLAQ7Z6A9 289 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 SETD3Q86TU7 594 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 FAM160B2Q86V87 743 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 SLCO4A1Q96BD0 722 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF518BQ9C0D4 1074 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 ILKAPQ9H0C8 392 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 TRPC7Q9HCX4 862 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 PRORSD1PA6NEY8 169 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 C2CD4BA6NLJ0 364 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 HTRA2O43464 458 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-204ENST00000438964 C2P06681 752 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 GRIA3P42263 894 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 C21orf59P57076 290 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 NIPAL4Q0D2K0 466 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 FAM47CQ5HY64 1035 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 EEF1DP3Q658K8 133 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 SLC15A3Q8IY34 581 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 CBR4Q8N4T8 237 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 GTSE1Q9NYZ3 720 aa13.63□□□□□ -0.23
ACTN1-204ENST00000438964 ADGRA2Q96PE1 1338 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 C1orf232A0A0U1RR37 186 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 GRID2O43424 1007 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 TRIM13O60858 407 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 BCAS2O75934 225 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 GABRB3P28472 473 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 GPD2P43304 727 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PERM1Q5SV97 790 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 STRIP1Q5VSL9 837 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CANT1Q8WVQ1 401 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PLEKHA8Q96JA3 519 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 NMRAL1Q9HBL8 299 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 TBC1D23Q9NUY8 699 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PCDHGC3Q9UN70 934 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 MCF2P10911 925 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CLCN2P51788 898 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PSME3P61289 254 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 EGFLAMQ63HQ2 1017 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PMF1Q6P1K2 205 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CHSY3Q70JA7 882 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 GPR180Q86V85 440 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PIGZQ86VD9 579 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 FAM131BQ86XD5 332 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 RNF135Q8IUD6 432 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 ZC3H7AQ8IWR0 971 aaKnown RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PARP8Q8N3A8 854 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CCDC185Q8N715 623 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 DNAAF3Q8N9W5 541 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 KCTD4Q8WVF5 259 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 GPATCH1Q9BRR8 931 aaKnown RBP13.62□□□□□ -0.23
ACTN1-204ENST00000438964 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 CXorf21Q9HAI6 301 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 SMOXQ9NWM0 555 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 PLK2Q9NYY3 685 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 TSPAN16Q9UKR8 245 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 TSC22D4Q9Y3Q8 395 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 SNX9Q9Y5X1 595 aa13.62□□□□□ -0.23
ACTN1-204ENST00000438964 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 MATN2O00339 956 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 FAM189A1O60320 539 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 HOXC6P09630 235 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ACAT1P24752 427 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CHRNA5P30532 468 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 MAGEA3P43357 314 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 ALDH3B2P48448 385 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 DCDC5Q6ZRR9 648 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CARM1Q86X55 608 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 C7orf31Q8N865 590 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 COX4I2Q96KJ9 171 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 HEPHQ9BQS7 1158 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 FRMD8P1Q9BZ68 369 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 INO80BQ9C086 356 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 PORCNQ9H237 461 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 CNOT6Q9ULM6 557 aaKnown RBP13.61□□□□□ -0.23
ACTN1-204ENST00000438964 DGKBQ9Y6T7 804 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 NUP205Q92621 2012 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 C9IYK1 514 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 H3BMQ9 156 aa13.61□□□□□ -0.23
ACTN1-204ENST00000438964 HDAC3O15379 428 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms