RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ZBTB42B2RXF5 422 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 CHRM3P20309 590 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 EEF1B2P24534 225 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 AIF1P55008 147 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 GDF10P55107 478 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 HDAC4P56524 1084 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 FUT10Q6P4F1 479 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZYG11BQ9C0D3 744 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 NDE1Q9NXR1 346 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 ANGPTL2Q9UKU9 493 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
TRAPPC9-202ENST00000438773 RHOBTB1O94844 696 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 LRIG2O94898 1065 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 PYGLP06737 847 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 CSH1P0DML2 217 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 CSH2P0DML3 217 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 PBX3P40426 434 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 RNASEH2BQ5TBB1 312 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 OLFML1Q6UWY5 402 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 NLRP9Q7RTR0 991 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ST13P4Q8IZP2 240 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 TMA16Q96EY4 203 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 GMIPQ9P107 970 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 PIRO00625 290 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 DGKIO75912 1065 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 CCND1P24385 295 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 CDH5P33151 784 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 RPA3P35244 121 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 NRLP54845 237 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SPANXN3Q5MJ09 141 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF470Q6ECI4 717 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 PTRHD1Q6GMV3 140 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 CGB2Q6NT52 195 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 C16orf59Q7L2K0 433 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 TAC4Q86UU9 113 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 DDIASQ8IXT1 998 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 GALNT4Q8N4A0 578 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SLC35B2Q8TB61 432 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 APOPT1Q96IL0 206 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 RHBDL2Q9NX52 303 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 HEY2Q9UBP5 337 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ARVCFO00192 962 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SEC24DO94855 1032 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 STAU1O95793 577 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 BNIP1Q12981 228 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 FAM182AQ5T1J6 154 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 SERPINI1Q99574 410 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 TBL1YQ9BQ87 522 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZCWPW1Q9H0M4 648 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 TMEM161AQ9NX61 479 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 HACD3Q9P035 362 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 RUVBL2Q9Y230 463 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 ANKRD31Q8N7Z5 1873 aa11.78□□□□□ -0.52
TRAPPC9-202ENST00000438773 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 CPA3P15088 417 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 TCEAL1Q15170 157 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 N4BP2L1Q5TBK1 243 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 ANKLE1Q8NAG6 615 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 LRGUKQ96M69 825 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 UNKQ9C0B0 810 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 IL22Q9GZX6 179 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 SUN2Q9UH99 717 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 ZMYND8Q9ULU4 1186 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 LZTS1Q9Y250 596 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 SNX10Q9Y5X0 201 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 SPTLC1O15269 473 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 TP73O15350 636 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 TYMPP19971 482 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 AKT1P31749 480 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 MAXP61244 160 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 MTA1Q13330 715 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 GALNTL6Q49A17 601 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 RETSATQ6NUM9 610 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 MTDHQ86UE4 582 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 YAF2Q8IY57 180 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 PIWIL1Q96J94 861 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 SH3GL3Q99963 347 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 UXTQ9UBK9 157 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 CNTN6Q9UQ52 1028 aa11.77□□□□□ -0.52
TRAPPC9-202ENST00000438773 MEIS3P2A8K0S8 358 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 HDCP19113 662 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 WEE1P30291 646 aa11.77□□□□□ -0.53
TRAPPC9-202ENST00000438773 RIPK1Q13546 671 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms